RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 USP17L6PQ6QN14 398 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TMEM260Q9NX78 707 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TANC1Q9C0D5 1861 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 HMGCRP04035 888 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 MYL1P05976 194 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 JAK3P52333 1124 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 GJA9P57773 515 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 KRT85P78386 507 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 KRT76Q01546 638 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 DUSP28Q4G0W2 176 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 RESP18Q5W5W9 173 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CCSAPQ6IQ19 270 aaPredicted RBP12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ARMCX2Q7L311 632 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 KLHDC9Q8NEP7 349 aa12.66□□□□□ -0.38
CSGALNACT2-201ENST00000374466 OR52Z1P0C646 297 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 NEDD9Q14511 834 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 FOXR2Q6PJQ5 311 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 NCAPG2Q86XI2 1143 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ANKRD35Q8N283 1001 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ZNF296Q8WUU4 475 aaPredicted RBP12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TNPO1Q92973 898 aaKnown RBP12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 PAK6Q9NQU5 681 aaPredicted RBP12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 COL4A6Q14031 1691 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 UBE2SQ16763 222 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 USH1GQ495M9 461 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 OTOP1Q7RTM1 612 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 PLPPR4Q7Z2D5 763 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ANKLE1Q8NAG6 615 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 SCFD2Q8WU76 684 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 TIPINQ9BVW5 301 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 BIN2Q9UBW5 565 aaPredicted RBP12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 IVNS1ABPQ9Y6Y0 642 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 MSH4O15457 936 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CMA1P23946 247 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 PKP1Q13835 747 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 ARHGEF16Q5VV41 709 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 PPTC7Q8NI37 304 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 KCND2Q9NZV8 630 aa12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 DDX25Q9UHL0 483 aaKnown RBP12.65□□□□□ -0.38
CSGALNACT2-201ENST00000374466 CTAGE5O15320 804 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 NEMFO60524 1076 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 PSMC4P43686 418 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 SNAP25P60880 206 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 COBLL1Q53SF7 1204 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 CELF3Q5SZQ8 465 aaKnown RBP12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 SMYD5Q6GMV2 418 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 PIK3AP1Q6ZUJ8 805 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 LEO1Q8WVC0 666 aaPredicted RBP12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 DBR1Q9UK59 544 aaKnown RBP12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 HAS3O00219 553 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 STBD1O95210 358 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 BAG4O95429 457 aaKnown RBP12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 RPLP2P05387 115 aaKnown RBP12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 EPHA7Q15375 998 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 METTL7BQ6UX53 244 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 RPAINQ86UA6 219 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 SLC43A3Q8NBI5 491 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 IL31RAQ8NI17 732 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 A6NJR5 290 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 RBL2Q08999 1139 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 LAMC2Q13753 1193 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 IL17AQ16552 155 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 RBM43Q6ZSC3 357 aaKnown RBP12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 CTU1Q7Z7A3 348 aaKnown RBP12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 FLRT1Q9NZU1 646 aa12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 MAFBQ9Y5Q3 323 aaPredicted RBP12.64□□□□□ -0.39
CSGALNACT2-201ENST00000374466 DUSP11O75319 330 aaKnown RBP12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 PRKCSHP14314 528 aaPredicted RBP12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 ARHGAP1Q07960 439 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 FBXO46Q6PJ61 603 aaPredicted RBP12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 USP28Q96RU2 1077 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 CEP89Q96ST8 783 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 HSD17B14Q9BPX1 270 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 GTPBP4Q9BZE4 634 aaKnown RBP12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 GJB4Q9NTQ9 266 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 KDM3AQ9Y4C1 1321 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 MCM3APO60318 1980 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 WNT7AO00755 349 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 DKC1O60832 514 aaKnown RBP eCLIP12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 CFBP00751 764 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 ABHD15Q6UXT9 468 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 NOL8Q76FK4 1167 aaKnown RBP12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 NIFKQ9BYG3 293 aaKnown RBP12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 NAP1L2Q9ULW6 460 aaPredicted RBP12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 PCDHB6Q9Y5E3 794 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 DOCK5Q9H7D0 1870 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 TNPO2O14787 897 aaKnown RBP12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 SLC37A4O43826 429 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 FARP2O94887 1054 aaPredicted RBP12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 ACVR2BQ13705 512 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 INF2Q27J81 1249 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 MFSD14CQ5VZR4 134 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 SH3RF1Q7Z6J0 888 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 CPXCR1Q8N123 301 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 ENGASEQ8NFI3 743 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 PAGR1Q9BTK6 254 aa12.63□□□□□ -0.39
CSGALNACT2-201ENST00000374466 hCG_1642624A0A1W2PR95 340 aa12.62□□□□□ -0.39
CSGALNACT2-201ENST00000374466 SEPT4O43236 478 aa12.62□□□□□ -0.39
CSGALNACT2-201ENST00000374466 CNTN2Q02246 1040 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms