RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 ZSWIM5Q9P217 1185 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 BRD1O95696 1058 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 RBM10P98175 930 aaKnown RBP10.76□□□□□ -0.69
SCAF11-202ENST00000369367 FAM83BQ5T0W9 1011 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 TBC1D16Q8TBP0 767 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 TIGD1Q96MW7 591 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 CETPP11597 493 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 ZNF157P51786 506 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-202ENST00000369367 GOLGA8FQ08AF8 430 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 GOLGA8DPQ0D2H9 430 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 EXOC3L4Q17RC7 722 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 C1orf228Q6PIY5 440 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 KATNAL1Q9BW62 490 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 RAB17Q9H0T7 212 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 LRRC4Q9HBW1 653 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.76□□□□□ -0.69
SCAF11-202ENST00000369367 V9GYY5 206 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-202ENST00000369367 A0A0G2JLW4 131 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 MMP1P03956 469 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 FKBP3Q00688 224 aaKnown RBP10.76□□□□□ -0.69
SCAF11-202ENST00000369367 MAP7Q14244 749 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 RSBN1LQ6PCB5 846 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-202ENST00000369367 EEPD1Q7L9B9 569 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 KBTBD13C9JR72 458 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 PRDX5P30044 214 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 P3H4Q92791 437 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 SYMPKQ92797 1274 aaKnown RBP10.76□□□□□ -0.69
SCAF11-202ENST00000369367 LBHD1Q9BQE6 289 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-202ENST00000369367 PLCD4Q9BRC7 762 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 IFIH1Q9BYX4 1025 aaKnown RBP10.76□□□□□ -0.69
SCAF11-202ENST00000369367 SRGAP2BP0DMP2 458 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 EFCAB13Q8IY85 973 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 CCDC68Q9H2F9 335 aa10.76□□□□□ -0.69
SCAF11-202ENST00000369367 FAM207AQ9NSI2 230 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-202ENST00000369367 CPS1P31327 1500 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 A6NNZ2 444 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 HDLBPQ00341 1268 aaKnown RBP10.75□□□□□ -0.69
SCAF11-202ENST00000369367 COG2Q14746 738 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 TUBB8Q3ZCM7 444 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 IFT81Q8WYA0 676 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 ATP6V0A4Q9HBG4 840 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 TTLL3Q9Y4R7 772 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 SPATA1Q5VX52 437 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 RUNDC3BQ96NL0 473 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 SCRN1Q12765 414 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 LRMPQ12912 555 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 SCYL2Q6P3W7 929 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 GJA10Q969M2 543 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 MYO1AQ9UBC5 1043 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 ZKSCAN5Q9Y2L8 839 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 DENND3A2RUS2 1198 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 WDR46O15213 610 aaKnown RBP10.75□□□□□ -0.69
SCAF11-202ENST00000369367 SLC25A27O95847 323 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 EEF1GP26641 437 aaKnown RBP10.75□□□□□ -0.69
SCAF11-202ENST00000369367 CHRNA5P30532 468 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 DSTYKQ6XUX3 929 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 FAM186BQ8IYM0 893 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 RNF139Q8WU17 664 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 USP28Q96RU2 1077 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 NRXN1Q9ULB1 1477 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 DIP2BQ9P265 1576 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 E9PCH4 1651 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 EVCP57679 992 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 LMNB2Q03252 620 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 CASC4Q6P4E1 433 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 ZNF34Q8IZ26 560 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 BBOF1Q8ND07 529 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 PCDHB4Q9Y5E5 795 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 IQSEC2Q5JU85 1478 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 KIF28PB7ZC32 967 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 MAPK6Q16659 721 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 NDUFAF2Q8N183 169 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 TRIM58Q8NG06 486 aa10.75□□□□□ -0.69
SCAF11-202ENST00000369367 U2AF1L4Q8WU68 220 aaKnown RBP10.75□□□□□ -0.69
SCAF11-202ENST00000369367 NR2F2P24468 414 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 CCDC105Q8IYK2 499 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 DCP1AQ9NPI6 582 aaPredicted RBP10.74□□□□□ -0.69
SCAF11-202ENST00000369367 NFX1Q12986 1120 aaKnown RBP10.74□□□□□ -0.69
SCAF11-202ENST00000369367 NBPF11Q86T75 865 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 PSPC1Q8WXF1 523 aaKnown RBP10.74□□□□□ -0.69
SCAF11-202ENST00000369367 STAMQ92783 540 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 NLRC4Q9NPP4 1024 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 H2AFZP0C0S5 128 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 CALRP27797 417 aaKnown RBP10.74□□□□□ -0.69
SCAF11-202ENST00000369367 GBP1P32455 592 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 TFAMQ00059 246 aaKnown RBP10.74□□□□□ -0.69
SCAF11-202ENST00000369367 H2AFVQ71UI9 128 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 ANKRD13AQ8IZ07 590 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 SERPINA10Q9UK55 444 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 CEP104O60308 925 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 MAN1A1P33908 653 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 SETDB1Q15047 1291 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 GPR101Q96P66 508 aaPredicted RBP10.74□□□□□ -0.69
SCAF11-202ENST00000369367 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.74□□□□□ -0.69
SCAF11-202ENST00000369367 PFDN4Q9NQP4 134 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 XRCC6P12956 609 aaKnown RBP eCLIP10.74□□□□□ -0.695e-9■□□□□ 8.2
SCAF11-202ENST00000369367 MTMR3Q13615 1198 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 FAM173BQ6P4H8 233 aa10.74□□□□□ -0.69
SCAF11-202ENST00000369367 DDX23Q9BUQ8 820 aaKnown RBP10.74□□□□□ -0.69
SCAF11-202ENST00000369367 TEX13BQ9BXU2 312 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms