RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 TRIM11Q96F44 468 aa22.41■■□□□ 1.18
NCKAP1-201ENST00000360982 SNX25Q9H3E2 840 aa22.41■■□□□ 1.18
NCKAP1-201ENST00000360982 TDRD3Q9H7E2 651 aaKnown RBP22.41■■□□□ 1.18
NCKAP1-201ENST00000360982 KRT15P19012 456 aa22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 BSPRYQ5W0U4 402 aa22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 EEF1GP26641 437 aaKnown RBP22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 CLCN6P51797 869 aa22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 KIF23Q02241 960 aaPredicted RBP22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 TRIM28Q13263 835 aaKnown RBP22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 HHATQ5VTY9 493 aa22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 NLRP7Q8WX94 980 aa22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 GPR101Q96P66 508 aaPredicted RBP22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 WRNIP1Q96S55 665 aa22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 CYP2D7A0A087X1C5 515 aa22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 ATP11AP98196 1134 aa22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 RABGGTAQ92696 567 aa22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 ADKP55263 362 aaKnown RBP22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 MTERF2Q49AM1 385 aa22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 SPTLC3Q9NUV7 552 aa22.4■■□□□ 1.18
NCKAP1-201ENST00000360982 SLFN14P0C7P3 912 aa22.39■■□□□ 1.18
NCKAP1-201ENST00000360982 FANCLQ9NW38 375 aa22.39■■□□□ 1.18
NCKAP1-201ENST00000360982 ZHX2Q9Y6X8 837 aa22.39■■□□□ 1.18
NCKAP1-201ENST00000360982 A0A087WUV0 522 aaPredicted RBP22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 FDX1P10109 184 aa22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 PRDX5P30044 214 aa22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 MKRN3Q13064 507 aaKnown RBP22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 SP8Q8IXZ3 490 aa22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 GIMAP8Q8ND71 665 aaPredicted RBP22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 CELF1Q92879 486 aaKnown RBP22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 TUBGCP2Q9BSJ2 902 aa22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 PARVGQ9HBI0 331 aa22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 MYO1FO00160 1098 aa22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 MUM1L1Q5H9M0 696 aa22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 CNOT6LQ96LI5 555 aaKnown RBP22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 HYOU1Q9Y4L1 999 aa22.39■■□□□ 1.17
NCKAP1-201ENST00000360982 ZNF233A6NK53 670 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 TCP1P17987 556 aaKnown RBP22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 TDRD7Q8NHU6 1098 aaKnown RBP22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 FAM167AQ96KS9 214 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 LMNB1P20700 586 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 MTA3Q9BTC8 594 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 ISCA1Q9BUE6 129 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 A6NJR5 290 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 CCT5P48643 541 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 VPS72Q15906 364 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 VPS37BQ9H9H4 285 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 PCDHB4Q9Y5E5 795 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 GNAT1P11488 350 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 CTAGE3PQ8IX95 158 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 P2RX5Q93086 422 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 FAM149B1Q96BN6 582 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 SH3GLB2Q9NR46 395 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 ERCC6L2Q5T890 1561 aa22.38■■□□□ 1.17
NCKAP1-201ENST00000360982 USP31Q70CQ4 1352 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 ARL6IP4Q66PJ3 421 aaKnown RBP22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 PPFIBP2Q8ND30 876 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 SH3RF3Q8TEJ3 882 aaPredicted RBP22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 COPB1P53618 953 aaKnown RBP22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 MYO1EQ12965 1108 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 STAG1Q8WVM7 1258 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 PLCB1Q9NQ66 1216 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 FEM1BQ9UK73 627 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 PPP2R2CQ9Y2T4 447 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 USP17L10C9JJH3 530 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 PNMA6AP0CW24 399 aaPredicted RBP22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 PSMD2Q13200 908 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 PGBD1Q96JS3 809 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 I3L4J1 428 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 TPD52P55327 224 aaPredicted RBP22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 TFAMQ00059 246 aaKnown RBP22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 PLCB4Q15147 1175 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 STXBP2Q15833 593 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 SUGT1Q9Y2Z0 365 aa22.37■■□□□ 1.17
NCKAP1-201ENST00000360982 CYP2E1P05181 493 aaPredicted RBP22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 JAK3P52333 1124 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 SPATS2Q86XZ4 545 aaKnown RBP22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 PPP1R13BQ96KQ4 1090 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 CAPS2Q9BXY5 557 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 KCNK3O14649 394 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 TBC1D8O95759 1140 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 HOXD10P28358 340 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 CACNB3P54284 484 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 CUL4AQ13619 759 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 NFIXQ14938 502 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 PALM2Q8IXS6 379 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 TCP11Q8WWU5 503 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 PPP1R12CQ9BZL4 782 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 RINT1Q6NUQ1 792 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 SLC12A6Q9UHW9 1150 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 AFPP02771 609 aaKnown RBP22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 PHBP35232 272 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 CCDC68Q9H2F9 335 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 ATP8B3O60423 1300 aa22.36■■□□□ 1.17
NCKAP1-201ENST00000360982 SPDYE16A6NNV3 312 aaPredicted RBP22.35■■□□□ 1.17
NCKAP1-201ENST00000360982 ZBTB22O15209 634 aa22.35■■□□□ 1.17
NCKAP1-201ENST00000360982 COPB2P35606 906 aa22.35■■□□□ 1.17
NCKAP1-201ENST00000360982 NR5A1Q13285 461 aa22.35■■□□□ 1.17
NCKAP1-201ENST00000360982 WHAMMP3Q1A5X7 153 aa22.35■■□□□ 1.17
NCKAP1-201ENST00000360982 SPDYE2Q495Y8 402 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms