RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 COA7Q96BR5 231 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 MYOZ2Q9NPC6 264 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 SPTLC2O15270 562 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 SART1O43290 800 aaKnown RBP6.41□□□□□ -1.38
CD47-201ENST00000355354 USP2O75604 605 aaPredicted RBP6.41□□□□□ -1.38
CD47-201ENST00000355354 TDP2O95551 362 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 GAD2Q05329 585 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 SPP2Q13103 211 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 QPCTQ16769 361 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 FBXW10Q5XX13 1052 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 RGMBQ6NW40 437 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 ISLR2Q6UXK2 745 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 BRAPQ7Z569 592 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 SUPT20HQ8NEM7 779 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 ADGRG1Q9Y653 693 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 ESPL1Q14674 2120 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 TLN2Q9Y4G6 2542 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 DENND4AQ7Z401 1863 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 TNKSO95271 1327 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 PDE8AO60658 829 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 CASP4P49662 377 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 KRT85P78386 507 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 SLC39A14Q15043 492 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 ANO1Q5XXA6 986 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 RSRC2Q7L4I2 434 aaKnown RBP6.4□□□□□ -1.38
CD47-201ENST00000355354 ADAT2Q7Z6V5 191 aaKnown RBP6.4□□□□□ -1.38
CD47-201ENST00000355354 GLIS1Q8NBF1 620 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 ALG1Q9BT22 464 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 TOMM22Q9NS69 142 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 URI1O94763 535 aaPredicted RBP6.4□□□□□ -1.38
CD47-201ENST00000355354 NOL4O94818 638 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 NUMBP49757 651 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 ETF1P62495 437 aaKnown RBP6.4□□□□□ -1.38
CD47-201ENST00000355354 MIIPQ5JXC2 388 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 CIAPIN1Q6FI81 312 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.4□□□□□ -1.38
CD47-201ENST00000355354 SYMPKQ92797 1274 aaKnown RBP6.4□□□□□ -1.38
CD47-201ENST00000355354 ZNF622Q969S3 477 aaKnown RBP eCLIP6.4□□□□□ -1.38
CD47-201ENST00000355354 SDF4Q9BRK5 362 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 SAP30BPQ9UHR5 308 aaKnown RBP6.4□□□□□ -1.38
CD47-201ENST00000355354 ROBO3Q96MS0 1386 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 SPG11Q96JI7 2443 aa6.4□□□□□ -1.38
CD47-201ENST00000355354 HGSO14964 777 aaPredicted RBP6.4□□□□□ -1.39
CD47-201ENST00000355354 PRPF6O94906 941 aaKnown RBP6.4□□□□□ -1.39
CD47-201ENST00000355354 STAT3P40763 770 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 KCNMA1Q12791 1236 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 G3BP1Q13283 466 aaKnown RBP eCLIP6.4□□□□□ -1.39
CD47-201ENST00000355354 MPP2Q14168 576 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 COG2Q14746 738 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 NR1I3Q14994 352 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 NOL9Q5SY16 702 aaKnown RBP6.4□□□□□ -1.39
CD47-201ENST00000355354 PLEKHO2Q8TD55 490 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 NUP133Q8WUM0 1156 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 PIK3R5Q8WYR1 880 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 CWC22Q9HCG8 908 aaKnown RBP6.4□□□□□ -1.39
CD47-201ENST00000355354 TAS2R14Q9NYV8 317 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 F8W031 263 aaPredicted RBP6.4□□□□□ -1.39
CD47-201ENST00000355354 DYNC1I1O14576 645 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 MAP3K9P80192 1104 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 BYSLQ13895 437 aaKnown RBP6.4□□□□□ -1.39
CD47-201ENST00000355354 CAPZA3Q96KX2 299 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 SEMA6BQ9H3T3 888 aa6.4□□□□□ -1.39
CD47-201ENST00000355354 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.4□□□□□ -1.39
CD47-201ENST00000355354 APPP05067 770 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 CCDC142Q17RM4 750 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 GPAT2Q6NUI2 795 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 SH3BP5LQ7L8J4 393 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 PODNQ7Z5L7 613 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 FAM212AQ96EL1 285 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 ZNF333Q96JL9 665 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 TTYH3Q9C0H2 523 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 GAKO14976 1311 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 ELP1O95163 1332 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 GJB6O95452 261 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 CC2D1AQ6P1N0 951 aaPredicted RBP6.39□□□□□ -1.39
CD47-201ENST00000355354 KLHL34Q8N239 644 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 EPB41L4BQ9H329 900 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 CNOT8Q9UFF9 292 aaKnown RBP6.39□□□□□ -1.39
CD47-201ENST00000355354 PPP2R3BQ9Y5P8 575 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 GRIN2DO15399 1336 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 TULP2O00295 520 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 FAM160A1Q05DH4 1040 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 ADALQ6DHV7 355 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 JPH2Q9BR39 696 aaPredicted RBP6.39□□□□□ -1.39
CD47-201ENST00000355354 BLOC1S4Q9NUP1 217 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 RTEL1Q9NZ71 1219 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 RAD17O75943 681 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 TCF4P15884 667 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 UBXN2AP68543 259 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 EPC2Q52LR7 807 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 CES4AQ5XG92 561 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 PDXDC2PQ6P474 469 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 SH3RF1Q7Z6J0 888 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 VAT1LQ9HCJ6 419 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 SAMM50Q9Y512 469 aa6.39□□□□□ -1.39
CD47-201ENST00000355354 USP17L15C9J2P7 530 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 USP17L13C9JLJ4 530 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 ANKRD63C9JTQ0 380 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 USP17L11C9JVI0 530 aa6.38□□□□□ -1.39
CD47-201ENST00000355354 USP17L18D6R9N7 530 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms