RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TBCKQ8TEA7 893 aa19.58■□□□□ 0.73
APP-202ENST00000348990 TBC1D31Q96DN5 1066 aa19.58■□□□□ 0.73
APP-202ENST00000348990 SLC4A9Q96Q91 983 aa19.58■□□□□ 0.73
APP-202ENST00000348990 TAF1DQ9H5J8 278 aaPredicted RBP19.58■□□□□ 0.73
APP-202ENST00000348990 KLRF2D3W0D1 207 aa19.58■□□□□ 0.73
APP-202ENST00000348990 HSD17B3P37058 310 aa19.58■□□□□ 0.73
APP-202ENST00000348990 ZNF34Q8IZ26 560 aa19.58■□□□□ 0.73
APP-202ENST00000348990 SLC44A5Q8NCS7 719 aa19.58■□□□□ 0.73
APP-202ENST00000348990 LRRC45Q96CN5 670 aa19.58■□□□□ 0.73
APP-202ENST00000348990 SEC63Q9UGP8 760 aaKnown RBP19.58■□□□□ 0.73
APP-202ENST00000348990 LMTK3Q96Q04 1460 aa19.58■□□□□ 0.73
APP-202ENST00000348990 BCL9LQ86UU0 1499 aa19.58■□□□□ 0.72
APP-202ENST00000348990 PHF20L1A8MW92 1017 aa19.58■□□□□ 0.72
APP-202ENST00000348990 EZRP15311 586 aaKnown RBP19.58■□□□□ 0.72
APP-202ENST00000348990 CACNB1Q02641 598 aaPredicted RBP19.58■□□□□ 0.72
APP-202ENST00000348990 CENPPQ6IPU0 288 aa19.58■□□□□ 0.72
APP-202ENST00000348990 NEK8Q86SG6 692 aa19.58■□□□□ 0.72
APP-202ENST00000348990 SNX29Q8TEQ0 813 aa19.58■□□□□ 0.72
APP-202ENST00000348990 AK8Q96MA6 479 aa19.58■□□□□ 0.72
APP-202ENST00000348990 CARD10Q9BWT7 1032 aa19.58■□□□□ 0.72
APP-202ENST00000348990 C6orf50Q9HD87 102 aa19.58■□□□□ 0.72
APP-202ENST00000348990 BAIAP2L1Q9UHR4 511 aa19.58■□□□□ 0.72
APP-202ENST00000348990 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.58■□□□□ 0.72
APP-202ENST00000348990 LAMB4A4D0S4 1761 aa19.58■□□□□ 0.72
APP-202ENST00000348990 A0A087X0T9 212 aa19.57■□□□□ 0.72
APP-202ENST00000348990 POTEMA6NI47 508 aa19.57■□□□□ 0.72
APP-202ENST00000348990 FAM228BP0C875 321 aa19.57■□□□□ 0.72
APP-202ENST00000348990 ITGB3BPQ13352 177 aaPredicted RBP19.57■□□□□ 0.72
APP-202ENST00000348990 ADAT2Q7Z6V5 191 aaKnown RBP19.57■□□□□ 0.72
APP-202ENST00000348990 PIK3R5Q8WYR1 880 aa19.57■□□□□ 0.72
APP-202ENST00000348990 BAP1Q92560 729 aa19.57■□□□□ 0.72
APP-202ENST00000348990 LARP4BQ92615 738 aaKnown RBP19.57■□□□□ 0.72
APP-202ENST00000348990 LRP6O75581 1613 aa19.57■□□□□ 0.72
APP-202ENST00000348990 PKD1L3Q7Z443 1732 aa19.57■□□□□ 0.72
APP-202ENST00000348990 SERPING1P05155 500 aa19.57■□□□□ 0.72
APP-202ENST00000348990 HNRNPH3P31942 346 aaKnown RBP19.57■□□□□ 0.72
APP-202ENST00000348990 SMTNP53814 917 aa19.57■□□□□ 0.72
APP-202ENST00000348990 TMEM266Q2M3C6 531 aa19.57■□□□□ 0.72
APP-202ENST00000348990 RCSD1Q6JBY9 416 aa19.57■□□□□ 0.72
APP-202ENST00000348990 TMED8Q6PL24 325 aaPredicted RBP19.57■□□□□ 0.72
APP-202ENST00000348990 RUFY4Q6ZNE9 571 aa19.57■□□□□ 0.72
APP-202ENST00000348990 SAP30BPQ9UHR5 308 aaKnown RBP19.57■□□□□ 0.72
APP-202ENST00000348990 CEP83Q9Y592 693 aa19.57■□□□□ 0.72
APP-202ENST00000348990 KCPQ6ZWJ8 1503 aa19.57■□□□□ 0.72
APP-202ENST00000348990 KRIT1O00522 736 aa19.57■□□□□ 0.72
APP-202ENST00000348990 KRT18P05783 430 aaKnown RBP19.57■□□□□ 0.72
APP-202ENST00000348990 PCP11498 1178 aaKnown RBP19.57■□□□□ 0.72
APP-202ENST00000348990 MAGOHP61326 146 aaKnown RBP19.57■□□□□ 0.72
APP-202ENST00000348990 ASIC2Q16515 512 aa19.57■□□□□ 0.72
APP-202ENST00000348990 MSL1Q68DK7 614 aa19.57■□□□□ 0.72
APP-202ENST00000348990 KIRREL3Q8IZU9 778 aa19.57■□□□□ 0.72
APP-202ENST00000348990 MAGOHBQ96A72 148 aaKnown RBP19.57■□□□□ 0.72
APP-202ENST00000348990 SELENOSQ9BQE4 189 aa19.57■□□□□ 0.72
APP-202ENST00000348990 CCDC113Q9H0I3 377 aa19.57■□□□□ 0.72
APP-202ENST00000348990 MAGEF1Q9HAY2 307 aa19.57■□□□□ 0.72
APP-202ENST00000348990 DDX20Q9UHI6 824 aaKnown RBP19.57■□□□□ 0.72
APP-202ENST00000348990 FBXL5Q9UKA1 691 aa19.57■□□□□ 0.72
APP-202ENST00000348990 LAD1O00515 517 aa19.56■□□□□ 0.72
APP-202ENST00000348990 ORC4O43929 436 aa19.56■□□□□ 0.72
APP-202ENST00000348990 GBP2P32456 591 aaPredicted RBP19.56■□□□□ 0.72
APP-202ENST00000348990 ERVK-9P63128 1117 aa19.56■□□□□ 0.72
APP-202ENST00000348990 ZNF572Q7Z3I7 529 aaPredicted RBP19.56■□□□□ 0.72
APP-202ENST00000348990 KRT25Q7Z3Z0 450 aa19.56■□□□□ 0.72
APP-202ENST00000348990 VEZTQ9HBM0 779 aa19.56■□□□□ 0.72
APP-202ENST00000348990 SCP2P22307 547 aa19.56■□□□□ 0.72
APP-202ENST00000348990 CALCRLQ16602 461 aa19.56■□□□□ 0.72
APP-202ENST00000348990 KRT79Q5XKE5 535 aa19.56■□□□□ 0.72
APP-202ENST00000348990 PARP9Q8IXQ6 854 aa19.56■□□□□ 0.72
APP-202ENST00000348990 DDX12PQ92771 950 aa19.56■□□□□ 0.72
APP-202ENST00000348990 TMEM260Q9NX78 707 aa19.56■□□□□ 0.72
APP-202ENST00000348990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.56■□□□□ 0.72
APP-202ENST00000348990 QPCTQ16769 361 aa19.55■□□□□ 0.72
APP-202ENST00000348990 GKAP1Q5VSY0 366 aaPredicted RBP19.55■□□□□ 0.72
APP-202ENST00000348990 CADPS2Q86UW7 1296 aa19.55■□□□□ 0.72
APP-202ENST00000348990 MYOCDQ8IZQ8 938 aa19.55■□□□□ 0.72
APP-202ENST00000348990 USP38Q8NB14 1042 aa19.55■□□□□ 0.72
APP-202ENST00000348990 UBA5Q9GZZ9 404 aa19.55■□□□□ 0.72
APP-202ENST00000348990 TMBIM4Q9HC24 238 aa19.55■□□□□ 0.72
APP-202ENST00000348990 SH3GLB2Q9NR46 395 aa19.55■□□□□ 0.72
APP-202ENST00000348990 BARHL2Q9NY43 387 aa19.55■□□□□ 0.72
APP-202ENST00000348990 DAPK3O43293 454 aa19.55■□□□□ 0.72
APP-202ENST00000348990 CLNS1AP54105 237 aaKnown RBP19.55■□□□□ 0.72
APP-202ENST00000348990 PPP1R7Q15435 360 aa19.55■□□□□ 0.72
APP-202ENST00000348990 TCERG1LQ5VWI1 586 aa19.55■□□□□ 0.72
APP-202ENST00000348990 PNMA8AQ86V59 439 aaPredicted RBP19.55■□□□□ 0.72
APP-202ENST00000348990 TEX2Q8IWB9 1127 aa19.55■□□□□ 0.72
APP-202ENST00000348990 BMP2KQ9NSY1 1161 aaPredicted RBP19.55■□□□□ 0.72
APP-202ENST00000348990 AMACRQ9UHK6 382 aa19.55■□□□□ 0.72
APP-202ENST00000348990 ERVV-1B6SEH8 477 aa19.55■□□□□ 0.72
APP-202ENST00000348990 STXBP3O00186 592 aa19.55■□□□□ 0.72
APP-202ENST00000348990 CYTH3O43739 400 aa19.55■□□□□ 0.72
APP-202ENST00000348990 ELF1P32519 619 aa19.55■□□□□ 0.72
APP-202ENST00000348990 DHX9Q08211 1270 aaKnown RBP19.55■□□□□ 0.72
APP-202ENST00000348990 NAA25Q14CX7 972 aa19.55■□□□□ 0.72
APP-202ENST00000348990 NAB2Q15742 525 aa19.55■□□□□ 0.72
APP-202ENST00000348990 CYB5D1Q6P9G0 228 aa19.55■□□□□ 0.72
APP-202ENST00000348990 UNC13DQ70J99 1090 aa19.55■□□□□ 0.72
APP-202ENST00000348990 MDM1Q8TC05 714 aa19.55■□□□□ 0.72
APP-202ENST00000348990 SEC16BQ96JE7 1060 aa19.55■□□□□ 0.72
APP-202ENST00000348990 ARPP21Q9UBL0 812 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms