RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 MLXIPQ9HAP2 919 aa31.7■■■□□ 2.67
ATPAF1-201ENST00000329231 RIC8AQ9NPQ8 531 aa31.7■■■□□ 2.67
ATPAF1-201ENST00000329231 SCN10AQ9Y5Y9 1956 aa31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 SPATA31C2B4DYI2 1134 aa31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 FIBPO43427 364 aa31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 PDIA3P30101 505 aaKnown RBP31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 PTPN11Q06124 597 aaPredicted RBP31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 TOB2Q14106 344 aaPredicted RBP31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 TYW1BQ6NUM6 668 aa31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 NLRX1Q86UT6 975 aa31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 UPF3BQ9BZI7 483 aaKnown RBP31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 GLT8D2Q9H1C3 349 aa31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 HIPK3Q9H422 1215 aa31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 PCDHA6Q9UN73 950 aa31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 PCDHA8Q9Y5H6 950 aa31.69■■■□□ 2.66
ATPAF1-201ENST00000329231 ADCY7P51828 1080 aa31.68■■■□□ 2.66
ATPAF1-201ENST00000329231 NEDD9Q14511 834 aa31.68■■■□□ 2.66
ATPAF1-201ENST00000329231 SHHQ15465 462 aa31.68■■■□□ 2.66
ATPAF1-201ENST00000329231 PFKFB3Q16875 520 aaPredicted RBP31.68■■■□□ 2.66
ATPAF1-201ENST00000329231 TMEM199Q8N511 208 aa31.68■■■□□ 2.66
ATPAF1-201ENST00000329231 SMCO2A6NFE2 343 aa31.67■■■□□ 2.66
ATPAF1-201ENST00000329231 PPFIA4O75335 1185 aa31.67■■■□□ 2.66
ATPAF1-201ENST00000329231 SCG2P13521 617 aa31.67■■■□□ 2.66
ATPAF1-201ENST00000329231 CHMP4BP1P59074 171 aa31.67■■■□□ 2.66
ATPAF1-201ENST00000329231 AKAP17AQ02040 695 aaKnown RBP31.67■■■□□ 2.66
ATPAF1-201ENST00000329231 PPIGQ13427 754 aaKnown RBP eCLIP31.67■■■□□ 2.66
ATPAF1-201ENST00000329231 LRCH3Q96II8 777 aa31.67■■■□□ 2.66
ATPAF1-201ENST00000329231 KATNAL1Q9BW62 490 aa31.67■■■□□ 2.66
ATPAF1-201ENST00000329231 TRMT13Q9NUP7 481 aaKnown RBP31.67■■■□□ 2.66
ATPAF1-201ENST00000329231 PRPF3O43395 683 aaKnown RBP31.66■■■□□ 2.66
ATPAF1-201ENST00000329231 SORBS3O60504 671 aa31.66■■■□□ 2.66
ATPAF1-201ENST00000329231 HOXD8P13378 290 aaPredicted RBP31.66■■■□□ 2.66
ATPAF1-201ENST00000329231 HSDL1Q3SXM5 330 aa31.66■■■□□ 2.66
ATPAF1-201ENST00000329231 C9orf50Q5SZB4 431 aa31.66■■■□□ 2.66
ATPAF1-201ENST00000329231 KAT2BQ92831 832 aa31.66■■■□□ 2.66
ATPAF1-201ENST00000329231 PDRG1Q9NUG6 133 aa31.66■■■□□ 2.66
ATPAF1-201ENST00000329231 FOSP01100 380 aaPredicted RBP31.65■■■□□ 2.66
ATPAF1-201ENST00000329231 CYP2C18P33260 490 aa31.65■■■□□ 2.66
ATPAF1-201ENST00000329231 EPHB4P54760 987 aa31.65■■■□□ 2.66
ATPAF1-201ENST00000329231 ANAPC15P60006 121 aa31.65■■■□□ 2.66
ATPAF1-201ENST00000329231 SEMA3FQ13275 785 aa31.65■■■□□ 2.66
ATPAF1-201ENST00000329231 CDHR1Q96JP9 859 aa31.65■■■□□ 2.66
ATPAF1-201ENST00000329231 NOC4LQ9BVI4 516 aaKnown RBP31.65■■■□□ 2.66
ATPAF1-201ENST00000329231 CCT2P78371 535 aaKnown RBP31.64■■■□□ 2.66
ATPAF1-201ENST00000329231 NTRK3Q16288 839 aa31.64■■■□□ 2.66
ATPAF1-201ENST00000329231 METTL7BQ6UX53 244 aa31.64■■■□□ 2.66
ATPAF1-201ENST00000329231 CCDC12Q8WUD4 166 aaPredicted RBP31.64■■■□□ 2.66
ATPAF1-201ENST00000329231 GPRASP2Q96D09 838 aa31.64■■■□□ 2.66
ATPAF1-201ENST00000329231 ZNF274Q96GC6 653 aaPredicted RBP31.64■■■□□ 2.66
ATPAF1-201ENST00000329231 SENP7Q9BQF6 1050 aa31.64■■■□□ 2.66
ATPAF1-201ENST00000329231 RNF26Q9BY78 433 aaPredicted RBP31.64■■■□□ 2.66
ATPAF1-201ENST00000329231 NOP56O00567 594 aaKnown RBP31.63■■■□□ 2.65
ATPAF1-201ENST00000329231 F2P00734 622 aa31.63■■■□□ 2.65
ATPAF1-201ENST00000329231 IFNAR1P17181 557 aa31.63■■■□□ 2.65
ATPAF1-201ENST00000329231 GPR153Q6NV75 609 aa31.63■■■□□ 2.65
ATPAF1-201ENST00000329231 SESTD1Q86VW0 696 aa31.63■■■□□ 2.65
ATPAF1-201ENST00000329231 GIMAP8Q8ND71 665 aaPredicted RBP31.63■■■□□ 2.65
ATPAF1-201ENST00000329231 PPP1R13LQ8WUF5 828 aa31.63■■■□□ 2.65
ATPAF1-201ENST00000329231 PHKBQ93100 1093 aa31.63■■■□□ 2.65
ATPAF1-201ENST00000329231 LAMA3Q16787 3333 aa31.62■■■□□ 2.65
ATPAF1-201ENST00000329231 MYH7BA7E2Y1 1941 aa31.62■■■□□ 2.65
ATPAF1-201ENST00000329231 ZNF286BP0CG31 522 aa31.62■■■□□ 2.65
ATPAF1-201ENST00000329231 CSF2RAP15509 400 aa31.62■■■□□ 2.65
ATPAF1-201ENST00000329231 PSEN2P49810 448 aa31.62■■■□□ 2.65
ATPAF1-201ENST00000329231 AP3B2Q13367 1082 aa31.62■■■□□ 2.65
ATPAF1-201ENST00000329231 MFSD10Q14728 455 aa31.62■■■□□ 2.65
ATPAF1-201ENST00000329231 PKN1Q16512 942 aa31.62■■■□□ 2.65
ATPAF1-201ENST00000329231 CYFIP1Q7L576 1253 aa31.62■■■□□ 2.65
ATPAF1-201ENST00000329231 NCOA5Q9HCD5 579 aaKnown RBP31.62■■■□□ 2.65
ATPAF1-201ENST00000329231 NOD1Q9Y239 953 aa31.62■■■□□ 2.65
ATPAF1-201ENST00000329231 UBIAD1Q9Y5Z9 338 aa31.62■■■□□ 2.65
ATPAF1-201ENST00000329231 ESYT2A0FGR8 921 aa31.61■■■□□ 2.65
ATPAF1-201ENST00000329231 CYP2C9P11712 490 aa31.61■■■□□ 2.65
ATPAF1-201ENST00000329231 ITGB5P18084 799 aa31.61■■■□□ 2.65
ATPAF1-201ENST00000329231 RNPC3Q96LT9 517 aaKnown RBP31.61■■■□□ 2.65
ATPAF1-201ENST00000329231 SLC26A6Q9BXS9 759 aa31.61■■■□□ 2.65
ATPAF1-201ENST00000329231 BCAS3Q9H6U6 928 aa31.61■■■□□ 2.65
ATPAF1-201ENST00000329231 UMODL1Q5DID0 1318 aa31.6■■■□□ 2.65
ATPAF1-201ENST00000329231 KIAA0753Q2KHM9 967 aa31.6■■■□□ 2.65
ATPAF1-201ENST00000329231 C7orf31Q8N865 590 aa31.6■■■□□ 2.65
ATPAF1-201ENST00000329231 ALG1Q9BT22 464 aa31.6■■■□□ 2.65
ATPAF1-201ENST00000329231 ANO3Q9BYT9 981 aa31.6■■■□□ 2.65
ATPAF1-201ENST00000329231 ZMYND12Q9H0C1 365 aa31.6■■■□□ 2.65
ATPAF1-201ENST00000329231 C6orf50Q9HD87 102 aa31.6■■■□□ 2.65
ATPAF1-201ENST00000329231 HAS3O00219 553 aa31.59■■■□□ 2.65
ATPAF1-201ENST00000329231 CPLX1O14810 134 aa31.59■■■□□ 2.65
ATPAF1-201ENST00000329231 MAFGO15525 162 aa31.59■■■□□ 2.65
ATPAF1-201ENST00000329231 CLK2P49760 499 aaKnown RBP31.59■■■□□ 2.65
ATPAF1-201ENST00000329231 MTMR1Q13613 665 aa31.59■■■□□ 2.65
ATPAF1-201ENST00000329231 PTGISQ16647 500 aa31.59■■■□□ 2.65
ATPAF1-201ENST00000329231 LARP6Q9BRS8 491 aaKnown RBP31.59■■■□□ 2.65
ATPAF1-201ENST00000329231 JADE2Q9NQC1 790 aa31.59■■■□□ 2.65
ATPAF1-201ENST00000329231 CCL23P55773 120 aa31.58■■■□□ 2.65
ATPAF1-201ENST00000329231 TRIM22Q8IYM9 498 aa31.58■■■□□ 2.65
ATPAF1-201ENST00000329231 PGBD1Q96JS3 809 aa31.58■■■□□ 2.65
ATPAF1-201ENST00000329231 WNT8AQ9H1J5 351 aa31.58■■■□□ 2.65
ATPAF1-201ENST00000329231 IL23AQ9NPF7 189 aa31.58■■■□□ 2.65
ATPAF1-201ENST00000329231 GTF2IRD1Q9UHL9 959 aa31.58■■■□□ 2.65
ATPAF1-201ENST00000329231 PPFIA3O75145 1194 aa31.57■■■□□ 2.64
ATPAF1-201ENST00000329231 GNA11P29992 359 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms