RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 COG1Q8WTW3 980 aa17.98■□□□□ 0.47
SFXN1-201ENST00000321442 ZNF277Q9NRM2 450 aaPredicted RBP17.98■□□□□ 0.47
SFXN1-201ENST00000321442 PCDHA4Q9UN74 947 aa17.98■□□□□ 0.47
SFXN1-201ENST00000321442 USP32Q8NFA0 1604 aa17.98■□□□□ 0.47
SFXN1-201ENST00000321442 NEURL4Q96JN8 1562 aa17.98■□□□□ 0.47
SFXN1-201ENST00000321442 CYP2J2P51589 502 aa17.98■□□□□ 0.47
SFXN1-201ENST00000321442 ZNF365Q70YC5 407 aa17.98■□□□□ 0.47
SFXN1-201ENST00000321442 TBCKQ8TEA7 893 aa17.98■□□□□ 0.47
SFXN1-201ENST00000321442 COA7Q96BR5 231 aa17.98■□□□□ 0.47
SFXN1-201ENST00000321442 NOVA2Q9UNW9 492 aaKnown RBP17.98■□□□□ 0.47
SFXN1-201ENST00000321442 CD2APQ9Y5K6 639 aa17.98■□□□□ 0.47
SFXN1-201ENST00000321442 ATP2A1O14983 1001 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 CTNND1O60716 968 aaKnown RBP17.97■□□□□ 0.47
SFXN1-201ENST00000321442 EAPPQ56P03 285 aaPredicted RBP17.97■□□□□ 0.47
SFXN1-201ENST00000321442 C6orf163Q5TEZ5 329 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 MMS22LQ6ZRQ5 1243 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 RAB17Q9H0T7 212 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 EHMT1Q9H9B1 1298 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.97■□□□□ 0.47
SFXN1-201ENST00000321442 KIF20BQ96Q89 1820 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 SLCO1A2P46721 670 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 SYCE1Q8N0S2 351 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 IQCDQ96DY2 449 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 FUT8Q9BYC5 575 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 KIAA1024Q9UPX6 916 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 A0A1B0GTH6 734 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 KCNB2Q92953 911 aa17.97■□□□□ 0.47
SFXN1-201ENST00000321442 CALUO43852 315 aaPredicted RBP17.96■□□□□ 0.47
SFXN1-201ENST00000321442 MYCLP12524 364 aaPredicted RBP17.96■□□□□ 0.47
SFXN1-201ENST00000321442 PLTPP55058 493 aa17.96■□□□□ 0.47
SFXN1-201ENST00000321442 FKBP3Q00688 224 aaKnown RBP17.96■□□□□ 0.47
SFXN1-201ENST00000321442 DHX9Q08211 1270 aaKnown RBP17.96■□□□□ 0.47
SFXN1-201ENST00000321442 TCHPQ9BT92 498 aa17.96■□□□□ 0.47
SFXN1-201ENST00000321442 ADD3Q9UEY8 706 aaKnown RBP17.96■□□□□ 0.47
SFXN1-201ENST00000321442 ALDH3A1P30838 453 aa17.96■□□□□ 0.47
SFXN1-201ENST00000321442 NR1I3Q14994 352 aa17.96■□□□□ 0.47
SFXN1-201ENST00000321442 ENAHQ8N8S7 591 aaPredicted RBP17.96■□□□□ 0.47
SFXN1-201ENST00000321442 SERPINB13Q9UIV8 391 aa17.96■□□□□ 0.47
SFXN1-201ENST00000321442 COL5A2P05997 1499 aaPredicted RBP17.96■□□□□ 0.47
SFXN1-201ENST00000321442 SEMA3EO15041 775 aa17.96■□□□□ 0.47
SFXN1-201ENST00000321442 ICA1Q05084 483 aa17.96■□□□□ 0.47
SFXN1-201ENST00000321442 HIBCHQ6NVY1 386 aaPredicted RBP17.96■□□□□ 0.47
SFXN1-201ENST00000321442 SH2D3CQ8N5H7 860 aa17.96■□□□□ 0.47
SFXN1-201ENST00000321442 PNKPQ96T60 521 aa17.96■□□□□ 0.47
SFXN1-201ENST00000321442 TRIM7Q9C029 511 aa17.96■□□□□ 0.47
SFXN1-201ENST00000321442 ODF2LQ9ULJ1 636 aa17.96■□□□□ 0.47
SFXN1-201ENST00000321442 TFRCP02786 760 aaKnown RBP17.96■□□□□ 0.46
SFXN1-201ENST00000321442 TAOK1Q7L7X3 1001 aa17.96■□□□□ 0.46
SFXN1-201ENST00000321442 KANSL2Q9H9L4 492 aa17.96■□□□□ 0.46
SFXN1-201ENST00000321442 DCP1AQ9NPI6 582 aaPredicted RBP17.96■□□□□ 0.46
SFXN1-201ENST00000321442 NR2F2P24468 414 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 EXOC3L4Q17RC7 722 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 CAPN12Q6ZSI9 719 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 PACSIN2Q9UNF0 486 aaPredicted RBP17.95■□□□□ 0.46
SFXN1-201ENST00000321442 HPS5Q9UPZ3 1129 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 ZKSCAN8Q15776 578 aaPredicted RBP17.95■□□□□ 0.46
SFXN1-201ENST00000321442 EMBQ6PCB8 327 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 TPH2Q8IWU9 490 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 LZTS2Q9BRK4 669 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 THAP9Q9H5L6 903 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 STX2P32856 288 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 SNCBQ16143 134 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 PRR16Q569H4 304 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 TRIM68Q6AZZ1 485 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 USTQ9Y2C2 406 aa17.95■□□□□ 0.46
SFXN1-201ENST00000321442 KRT15P19012 456 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 PABPC4Q13310 644 aaKnown RBP eCLIP17.94■□□□□ 0.467e-19■□□□□ 8.5
SFXN1-201ENST00000321442 NCAPHQ15003 741 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 SPATS2Q86XZ4 545 aaKnown RBP17.94■□□□□ 0.46
SFXN1-201ENST00000321442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.94■□□□□ 0.46
SFXN1-201ENST00000321442 ARHGEF2Q92974 986 aaKnown RBP17.94■□□□□ 0.46
SFXN1-201ENST00000321442 SYNCQ9H7C4 482 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 INTS9Q9NV88 658 aaKnown RBP17.94■□□□□ 0.46
SFXN1-201ENST00000321442 ZBTB12Q9Y330 459 aaPredicted RBP17.94■□□□□ 0.46
SFXN1-201ENST00000321442 BACH1O14867 736 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 ZNF131P52739 623 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 APBA1Q02410 837 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 MCTP2Q6DN12 878 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 SGMS1Q86VZ5 419 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 FAM212AQ96EL1 285 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 LRRC1Q9BTT6 524 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 NT5C3AQ9H0P0 336 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 SMARCAL1Q9NZC9 954 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 GYPCP04921 128 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 HPS3Q969F9 1004 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 AGPAT5Q9NUQ2 364 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 PTPN22Q9Y2R2 807 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 ABCC12Q96J65 1359 aa17.94■□□□□ 0.46
SFXN1-201ENST00000321442 NPR1P16066 1061 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 GCKP35557 465 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 GFPT1Q06210 699 aaPredicted RBP17.93■□□□□ 0.46
SFXN1-201ENST00000321442 BARGINQ6ZT62 677 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 CCDC63Q8NA47 563 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 BANK1Q8NDB2 785 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 CCDC160A6NGH7 325 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 ACTN3Q08043 901 aaPredicted RBP17.93■□□□□ 0.46
SFXN1-201ENST00000321442 ALS2CLQ60I27 953 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 TMTC3Q6ZXV5 915 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 DPH6Q7L8W6 267 aa17.93■□□□□ 0.46
SFXN1-201ENST00000321442 IGDCC4Q8TDY8 1250 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms