RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 TBC1D7Q9P0N9 293 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 PRAMEF22A3QJZ6 481 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 EPHA10Q5JZY3 1008 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 CFAP61Q8NHU2 1237 aa18.12■□□□□ 0.49
PACS1-201ENST00000320580 PDE2AO00408 941 aaPredicted RBP18.11■□□□□ 0.49
PACS1-201ENST00000320580 MRPL12P52815 198 aaKnown RBP18.11■□□□□ 0.49
PACS1-201ENST00000320580 SNX1Q13596 522 aa18.11■□□□□ 0.49
PACS1-201ENST00000320580 KRT79Q5XKE5 535 aa18.11■□□□□ 0.49
PACS1-201ENST00000320580 DHTKD1Q96HY7 919 aaPredicted RBP18.11■□□□□ 0.49
PACS1-201ENST00000320580 PRMT1Q99873 361 aaKnown RBP18.11■□□□□ 0.49
PACS1-201ENST00000320580 LEMD3Q9Y2U8 911 aa18.11■□□□□ 0.49
PACS1-201ENST00000320580 ZNF609O15014 1411 aa18.11■□□□□ 0.49
PACS1-201ENST00000320580 FER1L4A9Z1Z3 1794 aa18.11■□□□□ 0.49
PACS1-201ENST00000320580 ZSCAN5CA6NGD5 496 aaPredicted RBP18.11■□□□□ 0.49
PACS1-201ENST00000320580 CD44P16070 742 aaKnown RBP18.11■□□□□ 0.49
PACS1-201ENST00000320580 ELF3P78545 371 aaPredicted RBP18.11■□□□□ 0.49
PACS1-201ENST00000320580 MB21D2Q8IYB1 491 aaPredicted RBP18.11■□□□□ 0.49
PACS1-201ENST00000320580 STOML1Q9UBI4 398 aa18.11■□□□□ 0.49
PACS1-201ENST00000320580 PARP2Q9UGN5 583 aa18.11■□□□□ 0.49
PACS1-201ENST00000320580 HAUS3Q68CZ6 603 aa18.11■□□□□ 0.49
PACS1-201ENST00000320580 GSTA5Q7RTV2 222 aa18.11■□□□□ 0.49
PACS1-201ENST00000320580 H2AFZP0C0S5 128 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 PDE1CQ14123 709 aaPredicted RBP18.1■□□□□ 0.49
PACS1-201ENST00000320580 RCN2Q14257 317 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 PTPAQ15257 358 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 C6orf118Q5T5N4 469 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 H2AFVQ71UI9 128 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 TEX9Q8N6V9 391 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 NAF1Q96HR8 494 aaKnown RBP18.1■□□□□ 0.49
PACS1-201ENST00000320580 PBKQ96KB5 322 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 IQCGQ9H095 443 aaKnown RBP18.1■□□□□ 0.49
PACS1-201ENST00000320580 STX8Q9UNK0 236 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 ATP6V0A2Q9Y487 856 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 ADGRB2O60241 1585 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 A0A1W2PQC6 194 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 LRRC53A6NM62 1247 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 RAD51CO43502 376 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 PPFIA2O75334 1257 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 PECAM1P16284 738 aaPredicted RBP18.1■□□□□ 0.49
PACS1-201ENST00000320580 CCNE1P24864 410 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 HERVK_113P62684 666 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 PDCD7Q8N8D1 485 aaKnown RBP18.1■□□□□ 0.49
PACS1-201ENST00000320580 CAPN6Q9Y6Q1 641 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 KIAA1210Q9ULL0 1709 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 FANCGO15287 622 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 MAP3K7O43318 606 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 SPOPO43791 374 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 NQO1P15559 274 aaKnown RBP18.1■□□□□ 0.49
PACS1-201ENST00000320580 HSD17B3P37058 310 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 NAPAP54920 295 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 LRIG3Q6UXM1 1119 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 NDST4Q9H3R1 872 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 TBK1Q9UHD2 729 aa18.1■□□□□ 0.49
PACS1-201ENST00000320580 VPS41P49754 854 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 BZW1Q7L1Q6 419 aaKnown RBP18.09■□□□□ 0.49
PACS1-201ENST00000320580 HS2ST1Q7LGA3 356 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 SYCP3Q8IZU3 236 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 NGLY1Q96IV0 654 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 SH2D4AQ9H788 454 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 SNX24Q9Y343 169 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 IKBKGQ9Y6K9 419 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 UBN2Q6ZU65 1347 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 FAM153BP0C7A2 387 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 FAM153CQ494X1 144 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 CCDC152Q4G0S7 254 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 ARMC3Q5W041 872 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 FAM153AQ9UHL3 310 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 PPP1R9AQ9ULJ8 1098 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 GLI1P08151 1106 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 TXKP42681 527 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 PI16Q6UXB8 463 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 CASKIN2Q8WXE0 1202 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 AMACRQ9UHK6 382 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 BICDL1Q6ZP65 573 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 KDM4CQ9H3R0 1056 aa18.09■□□□□ 0.49
PACS1-201ENST00000320580 ADORA1P30542 326 aa18.08■□□□□ 0.49
PACS1-201ENST00000320580 SLC1A4P43007 532 aa18.08■□□□□ 0.49
PACS1-201ENST00000320580 SERPINB4P48594 390 aa18.08■□□□□ 0.49
PACS1-201ENST00000320580 PPP2R5EQ16537 467 aa18.08■□□□□ 0.49
PACS1-201ENST00000320580 UBL4BQ8N7F7 174 aa18.08■□□□□ 0.49
PACS1-201ENST00000320580 HAUS1Q96CS2 278 aa18.08■□□□□ 0.49
PACS1-201ENST00000320580 TMBIM4Q9HC24 238 aa18.08■□□□□ 0.49
PACS1-201ENST00000320580 TOM1O60784 492 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 MAN2A1Q16706 1144 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 LRRC34Q8IZ02 419 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 FAM133AQ8N9E0 248 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 TRMT112Q9UI30 125 aaKnown RBP18.08■□□□□ 0.48
PACS1-201ENST00000320580 FAF1Q9UNN5 650 aaPredicted RBP18.08■□□□□ 0.48
PACS1-201ENST00000320580 CEP170BQ9Y4F5 1589 aaPredicted RBP18.08■□□□□ 0.48
PACS1-201ENST00000320580 TROVE2P10155 538 aaKnown RBP eCLIP18.08■□□□□ 0.48
PACS1-201ENST00000320580 EPB41P11171 864 aaKnown RBP18.08■□□□□ 0.48
PACS1-201ENST00000320580 GJC1P36383 396 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 IL9RQ01113 521 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 CYB5R4Q7L1T6 521 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 C3orf20Q8ND61 904 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 PPP1R14CQ8TAE6 165 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 CAVIN3Q969G5 261 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 SH3GL2Q99962 352 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 PITPNM3Q9BZ71 974 aa18.08■□□□□ 0.48
PACS1-201ENST00000320580 ZSWIM5Q9P217 1185 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms