RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SYNPO2Q9UMS6 1093 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 KDM3AQ9Y4C1 1321 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 NKRFO15226 690 aaKnown RBP eCLIP8.44□□□□□ -1.06
IFT88-201ENST00000319980 TUBB4AP04350 444 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 CCDC175P0C221 793 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 MTIF2P46199 727 aaKnown RBP8.44□□□□□ -1.06
IFT88-201ENST00000319980 TGFB2P61812 414 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 CACNB1Q02641 598 aaPredicted RBP8.44□□□□□ -1.06
IFT88-201ENST00000319980 CENPPQ6IPU0 288 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 MOXD1Q6UVY6 613 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 MTMR14Q8NCE2 650 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 ETNPPLQ8TBG4 499 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 ZNF507Q8TCN5 953 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 NOC3LQ8WTT2 800 aaKnown RBP8.44□□□□□ -1.06
IFT88-201ENST00000319980 MBOAT7Q96N66 472 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 VCPKMTQ9H867 229 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 FBXO28Q9NVF7 368 aa8.44□□□□□ -1.06
IFT88-201ENST00000319980 TTC26A0AVF1 554 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 POTEFA5A3E0 1075 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 FANCGO15287 622 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 TBC1D12O60347 775 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 MED24O75448 989 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 EGFRP00533 1210 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 PLA2G4BP0C869 781 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 POTEIP0CG38 1075 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 ERCC3P19447 782 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 MMP14P50281 582 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 GNG11P61952 73 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 NCBP1Q09161 790 aaKnown RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 TBC1D8BQ0IIM8 1120 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 MKRN4PQ13434 485 aaPredicted RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 RASA3Q14644 834 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 NCAPH2Q6IBW4 605 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 POTEGQ6S5H5 508 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 POTEEQ6S8J3 1075 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 CATSPER3Q86XQ3 398 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 CHURC1Q8WUH1 139 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 LENG9Q96B70 501 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 DNAJC19Q96DA6 116 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 CCDC51Q96ER9 411 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 LZTFL1Q9NQ48 299 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 TBC1D7Q9P0N9 293 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.43□□□□□ -1.06
IFT88-201ENST00000319980 V9GYY5 206 aaPredicted RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 GOLGA6L9A6NEM1 432 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 DNM2P50570 870 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 SPIRE1Q08AE8 756 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 TRIM14Q14142 442 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 Q4G0T1 1027 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 COBLL1Q53SF7 1204 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 HYIQ5T013 277 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 FAM114A1Q8IWE2 563 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 GUF1Q8N442 669 aaKnown RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 NOC4LQ9BVI4 516 aaKnown RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 MRPL44Q9H9J2 332 aaKnown RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 PANK4Q9NVE7 773 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 LUC7L2Q9Y383 392 aaKnown RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 ADGRG1Q9Y653 693 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 ZNF646O15015 1829 aaPredicted RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 NPHP3-ACAD11A0A0J9YXS1 232 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 A0A1W2PQC6 194 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 MEIS1O00470 390 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 MSH4O15457 936 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 URI1O94763 535 aaPredicted RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 SLU7O95391 586 aaKnown RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 ASNSP08243 561 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 TRIM21P19474 475 aaKnown RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 UBXN2AP68543 259 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 EHHADHQ08426 723 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 COASYQ13057 564 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 HAUS3Q68CZ6 603 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 TMTC1Q8IUR5 882 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 ZFP91Q96JP5 570 aaPredicted RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 WDR24Q96S15 920 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 FEZ1Q99689 392 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 IRX2Q9BZI1 471 aaPredicted RBP8.43□□□□□ -1.06
IFT88-201ENST00000319980 PDCL3Q9H2J4 239 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 ZHX3Q9H4I2 956 aa8.43□□□□□ -1.06
IFT88-201ENST00000319980 PHLPP2Q6ZVD8 1323 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 A0A0U1RQJ8 604 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 PIK3CDO00329 1044 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 TBX3O15119 743 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 CIITAP33076 1130 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 PSMC6P62333 389 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 ERVK-24P63145 666 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 CYP4A11Q02928 519 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 TRAF1Q13077 416 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 PSMD2Q13200 908 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 SYCP1Q15431 976 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 GPBP1Q86WP2 473 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 ERMNQ8TAM6 284 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 ATRIPQ8WXE1 791 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 ZBED3Q96IU2 234 aaPredicted RBP8.42□□□□□ -1.06
IFT88-201ENST00000319980 PCMTD1Q96MG8 357 aaPredicted RBP8.42□□□□□ -1.06
IFT88-201ENST00000319980 FAM20AQ96MK3 541 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 SH2D4AQ9H788 454 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 L2HGDHQ9H9P8 463 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 PGAP2Q9UHJ9 254 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 BCS1LQ9Y276 419 aa8.42□□□□□ -1.06
IFT88-201ENST00000319980 SRCAPQ6ZRS2 3230 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms