RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 GRAMD1CQ8IYS0 662 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 DTNBP1Q96EV8 351 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 ZCCHC17Q9NP64 241 aaKnown RBP16.05■□□□□ 0.16
SCN3B-201ENST00000299333 SAMSN1Q9NSI8 373 aaKnown RBP16.05■□□□□ 0.16
SCN3B-201ENST00000299333 PCDHA13Q9Y5I0 950 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 DENND4BO75064 1496 aaPredicted RBP16.05■□□□□ 0.16
SCN3B-201ENST00000299333 EIF4A3P38919 411 aaKnown RBP16.05■□□□□ 0.16
SCN3B-201ENST00000299333 IQCB1Q15051 598 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 EYA1Q99502 592 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 USP19O94966 1318 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 NPR1P16066 1061 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 NOP14P78316 857 aaKnown RBP16.05■□□□□ 0.16
SCN3B-201ENST00000299333 CYP27A1Q02318 531 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 PRPSAP1Q14558 356 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 FANCBQ8NB91 859 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 PLBD2Q8NHP8 589 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 TMEM60Q9H2L4 133 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 TLK1Q9UKI8 766 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 NPC1L1Q9UHC9 1359 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 PTK2Q05397 1052 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 DBNLQ9UJU6 430 aaKnown RBP16.05■□□□□ 0.16
SCN3B-201ENST00000299333 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 SYCE1LA8MT33 242 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 MCF2LO15068 1137 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 ARID5BQ14865 1188 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 NEK8Q86SG6 692 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 RETREG2Q8NC44 543 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 ZFP69BQ9UJL9 534 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 CTTNBP2Q8WZ74 1663 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 RASSF10A6NK89 507 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 TTI1O43156 1089 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 TNNC2P02585 160 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 GSPT2Q8IYD1 628 aaKnown RBP16.04■□□□□ 0.16
SCN3B-201ENST00000299333 KIFC3Q9BVG8 833 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 TRPV6Q9H1D0 765 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 ATP8A2Q9NTI2 1148 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 MAN1B1Q9UKM7 699 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 NOD1Q9Y239 953 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 MFAP3P55082 362 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 IFRD2Q12894 506 aaPredicted RBP16.04■□□□□ 0.16
SCN3B-201ENST00000299333 SESTD1Q86VW0 696 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 ZSCAN10Q96SZ4 725 aaPredicted RBP16.04■□□□□ 0.16
SCN3B-201ENST00000299333 SHANK2Q9UPX8 1470 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 RIMS2Q9UQ26 1411 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 UFL1O94874 794 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 RAD23BP54727 409 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 FLOT2Q14254 428 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 COL4A3BPQ9Y5P4 624 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 FLT4P35916 1363 aa16.04■□□□□ 0.16
SCN3B-201ENST00000299333 H3BRJ5 948 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 KRT1P04264 644 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 PIK3CAP42336 1068 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 MDM2Q00987 491 aaPredicted RBP16.03■□□□□ 0.16
SCN3B-201ENST00000299333 CUL1Q13616 776 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 TRIM59Q8IWR1 403 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 TGFBRAP1Q8WUH2 860 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 ING2Q9H160 280 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 HESX1Q9UBX0 185 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 LRRN2O75325 713 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 ATP5JP18859 108 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
SCN3B-201ENST00000299333 ARHGDIAP52565 204 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 SLC39A14Q15043 492 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 SUCLA2Q9P2R7 463 aaPredicted RBP16.03■□□□□ 0.16
SCN3B-201ENST00000299333 SLC4A1P02730 911 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 KCNA4P22459 653 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 KMT5BQ4FZB7 885 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 ENAHQ8N8S7 591 aaPredicted RBP16.03■□□□□ 0.16
SCN3B-201ENST00000299333 RAPGEF5Q92565 580 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 P2RX5Q93086 422 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 TTC17Q96AE7 1141 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 SPATA17Q96L03 361 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 ECT2Q9H8V3 914 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 KLC4Q9NSK0 619 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 DDX25Q9UHL0 483 aaKnown RBP16.03■□□□□ 0.16
SCN3B-201ENST00000299333 NR2F2P24468 414 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 BLVRAP53004 296 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 OCRLQ01968 901 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 CRLF3Q8IUI8 442 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 EYA3Q99504 573 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 C19orf44Q9H6X5 657 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 GINM1Q9NU53 330 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 BBS9Q3SYG4 887 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 DNAAF3Q8N9W5 541 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 SMCR8Q8TEV9 937 aaPredicted RBP16.03■□□□□ 0.16
SCN3B-201ENST00000299333 PAWRQ96IZ0 340 aaKnown RBP16.03■□□□□ 0.16
SCN3B-201ENST00000299333 TRIM15Q9C019 465 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 FTOQ9C0B1 505 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCN3B-201ENST00000299333 CNGB3Q9NQW8 809 aa16.03■□□□□ 0.16
SCN3B-201ENST00000299333 GTPBP10A4D1E9 387 aaKnown RBP16.02■□□□□ 0.16
SCN3B-201ENST00000299333 ATP5HO75947 161 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 CD2BP2O95400 341 aaKnown RBP16.02■□□□□ 0.16
SCN3B-201ENST00000299333 SPARCL1Q14515 664 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 LRRC41Q15345 812 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 LPIN2Q92539 896 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 DACH2Q96NX9 599 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 OLFM3Q96PB7 478 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 CARD14Q9BXL6 1004 aa16.02■□□□□ 0.16
SCN3B-201ENST00000299333 SRGAP2O75044 1071 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms