RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 POTECB2RU33 542 aa17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 PRPF6O94906 941 aaKnown RBP17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 MKRN4PQ13434 485 aaPredicted RBP17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 POTEBQ6S5H4 581 aa17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 CPLX4Q7Z7G2 160 aa17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 KRT14P02533 472 aa17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 ERMNQ8TAM6 284 aa17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 OSBPL9Q96SU4 736 aa17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 MXD3Q9BW11 206 aa17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 RCCD1A6NED2 376 aa17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 PPIP5K2O43314 1243 aa17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 PAK2Q13177 524 aa17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 SPATA4Q8NEY3 305 aa17.81■□□□□ 0.44
PDZRN3-201ENST00000263666 ZSCAN5CA6NGD5 496 aaPredicted RBP17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 GRIK5Q16478 980 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 NT5DC1Q5TFE4 455 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 MYCT1Q8N699 235 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 GLIS3Q8NEA6 775 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 ARMCX3Q9UH62 379 aaPredicted RBP17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 MKRN1Q9UHC7 482 aaKnown RBP17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 FEZ2Q9UHY8 353 aaPredicted RBP17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 ATP2B4P23634 1241 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 HOXA13P31271 388 aaPredicted RBP17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 ARHGAP25P42331 645 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 KRT71Q3SY84 523 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 LRRN2O75325 713 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 PCP11498 1178 aaKnown RBP17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 SCLT1Q96NL6 688 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 GJA3Q9Y6H8 435 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 GDF11O95390 407 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 FKBP3Q00688 224 aaKnown RBP17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 NNTQ13423 1086 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 RPGRIP1Q96KN7 1286 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 CCDC114Q96M63 670 aa17.8■□□□□ 0.44
PDZRN3-201ENST00000263666 AFDNP55196 1824 aaKnown RBP17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 NALCNQ8IZF0 1738 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 GSTTP1A0A1W2PQM5 241 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 DCAF8L1A6NGE4 600 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 KRIT1O00522 736 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 ORC4O43929 436 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 ACTN1P12814 892 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 CTNNA1P35221 906 aaKnown RBP17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 EN1Q05925 392 aaPredicted RBP17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 GRM4Q14833 912 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 SHISA4Q96DD7 197 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 FAM184BQ9ULE4 1060 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 SRGNP10124 158 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 SLC30A10Q6XR72 485 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 CCDC170Q8IYT3 715 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 IL17RBQ9NRM6 502 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 COL4A3BPQ9Y5P4 624 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 USP17L10C9JJH3 530 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 BUB1BO60566 1050 aaPredicted RBP17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 TTLL12Q14166 644 aaPredicted RBP17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 CCDC174Q6PII3 467 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 DNM3Q9UQ16 869 aa17.79■□□□□ 0.44
PDZRN3-201ENST00000263666 FAM237AA0A1B0GTK4 181 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 POTEFA5A3E0 1075 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 STXBP3O00186 592 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 PDE2AO00408 941 aaPredicted RBP17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 POTEIP0CG38 1075 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 POTEGQ6S5H5 508 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 POTEEQ6S8J3 1075 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 SRLQ86TD4 932 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 PPM1EQ8WY54 764 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 TOPAZ1Q8N9V7 1692 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 MYBL2P10244 700 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 XRCC5P13010 732 aaKnown RBP17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 GIMAP8Q8ND71 665 aaPredicted RBP17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 MRRFQ96E11 262 aaKnown RBP17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 LZTS2Q9BRK4 669 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 RBM12Q9NTZ6 932 aaKnown RBP17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 STIM2Q9P246 746 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 BBOX1O75936 387 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 IFT88Q13099 833 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 HPCAL4Q9UM19 191 aa17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 ATF5Q9Y2D1 282 aaPredicted RBP17.78■□□□□ 0.44
PDZRN3-201ENST00000263666 PPEF1O14829 653 aaPredicted RBP17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 CYTH3O43739 400 aa17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 GFPT2O94808 682 aa17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 AKR1B1P15121 316 aa17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 TAL1P17542 331 aaPredicted RBP17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 FAM83BQ5T0W9 1011 aa17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 PAIP2Q9BPZ3 127 aaKnown RBP17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 EPB41P11171 864 aaKnown RBP17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 VPS41P49754 854 aa17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 GRAPQ13588 217 aa17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 TTI2Q6NXR4 508 aa17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 HS2ST1Q7LGA3 356 aa17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 PTF1AQ7RTS3 328 aa17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 GRAPLQ8TC17 118 aaPredicted RBP17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 PIGOQ8TEQ8 1089 aa17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 AK8Q96MA6 479 aa17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 EMILIN3Q9NT22 766 aa17.77■□□□□ 0.44
PDZRN3-201ENST00000263666 SLC37A4O43826 429 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 RCAN1P53805 252 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 DDX42Q86XP3 938 aaKnown RBP eCLIP17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 MGARPQ8TDB4 240 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 TBC1D22AQ8WUA7 517 aa17.77■□□□□ 0.43
PDZRN3-201ENST00000263666 MAD2L2Q9UI95 211 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms