RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 KCNK18Q7Z418 384 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 SMYD4Q8IYR2 804 aaPredicted RBP22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 TRIM5Q9C035 493 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 KDM3AQ9Y4C1 1321 aa22.07■■□□□ 1.12
TNFRSF1A-201ENST00000162749 CCT6AP40227 531 aaKnown RBP22.06■■□□□ 1.12
TNFRSF1A-201ENST00000162749 ZNF75DP51815 510 aa22.06■■□□□ 1.12
TNFRSF1A-201ENST00000162749 SETQ01105 290 aaPredicted RBP22.06■■□□□ 1.12
TNFRSF1A-201ENST00000162749 TAAR1Q96RJ0 339 aa22.06■■□□□ 1.12
TNFRSF1A-201ENST00000162749 KLRC4O43908 158 aa22.06■■□□□ 1.12
TNFRSF1A-201ENST00000162749 CD44P16070 742 aaKnown RBP22.06■■□□□ 1.12
TNFRSF1A-201ENST00000162749 RAD54LQ92698 747 aa22.06■■□□□ 1.12
TNFRSF1A-201ENST00000162749 NT5C3AQ9H0P0 336 aa22.06■■□□□ 1.12
TNFRSF1A-201ENST00000162749 RMND1Q9NWS8 449 aa22.06■■□□□ 1.12
TNFRSF1A-201ENST00000162749 R3HCC1Q9Y3T6 440 aaKnown RBP22.06■■□□□ 1.12
TNFRSF1A-201ENST00000162749 ITGB5P18084 799 aa22.05■■□□□ 1.12
TNFRSF1A-201ENST00000162749 PLS1Q14651 629 aa22.05■■□□□ 1.12
TNFRSF1A-201ENST00000162749 SV2BQ7L1I2 683 aa22.05■■□□□ 1.12
TNFRSF1A-201ENST00000162749 C17orf53Q8N3J3 647 aaPredicted RBP22.05■■□□□ 1.12
TNFRSF1A-201ENST00000162749 SLC5A5Q92911 643 aa22.05■■□□□ 1.12
TNFRSF1A-201ENST00000162749 MED15Q96RN5 788 aa22.05■■□□□ 1.12
TNFRSF1A-201ENST00000162749 C7orf25Q9BPX7 421 aa22.05■■□□□ 1.12
TNFRSF1A-201ENST00000162749 MXRA8Q9BRK3 442 aa22.05■■□□□ 1.12
TNFRSF1A-201ENST00000162749 POTEB3A0JP26 581 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 PSMD10O75832 226 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 AMPD3Q01432 767 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 BAATQ14032 418 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 DHX8Q14562 1220 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 MCM6Q14566 821 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 KCNB1Q14721 858 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 PCNX4Q63HM2 1172 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 HAUS3Q68CZ6 603 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 NCAPH2Q6IBW4 605 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 POTEBQ6S5H4 581 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 LBX2Q6XYB7 198 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 PURBQ96QR8 312 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 RMDN3Q96TC7 470 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 MED24O75448 989 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 ARP10275 920 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 ERCC5P28715 1186 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 MRPS9P82933 396 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 NOLC1Q14978 699 aaKnown RBP eCLIP22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 PGM5Q15124 567 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 ZNF658Q5TYW1 1059 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 LRCH2Q5VUJ6 765 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 ZNF408Q9H9D4 720 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 RRAGCQ9HB90 399 aa22.04■■□□□ 1.12
TNFRSF1A-201ENST00000162749 PPP1R3GB7ZBB8 358 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 SLC26A4O43511 780 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 EIF2AK2P19525 551 aaKnown RBP22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 MOGSQ13724 837 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 KMT5BQ4FZB7 885 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 CT47A1Q5JQC4 288 aaPredicted RBP22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 OTOP1Q7RTM1 612 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 ACAD9Q9H845 621 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 PXMP2Q9NR77 195 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 KIAA1024Q9UPX6 916 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 TPM3P06753 285 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 TKFCQ3LXA3 575 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 CATSPER3Q86XQ3 398 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 TRMT44Q8IYL2 757 aaKnown RBP22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 ERMNQ8TAM6 284 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 PDCD2LQ9BRP1 358 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 A1CFQ9NQ94 594 aaKnown RBP22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 AGTPBP1Q9UPW5 1226 aa22.03■■□□□ 1.12
TNFRSF1A-201ENST00000162749 GOLGA6L6A8MZA4 724 aa22.02■■□□□ 1.12
TNFRSF1A-201ENST00000162749 PEX10O60683 326 aa22.02■■□□□ 1.12
TNFRSF1A-201ENST00000162749 RHOBTB3O94955 611 aa22.02■■□□□ 1.12
TNFRSF1A-201ENST00000162749 BCRP11274 1271 aa22.02■■□□□ 1.12
TNFRSF1A-201ENST00000162749 RPA1P27694 616 aa22.02■■□□□ 1.12
TNFRSF1A-201ENST00000162749 TERF1P54274 439 aa22.02■■□□□ 1.12
TNFRSF1A-201ENST00000162749 TPM4P67936 248 aa22.02■■□□□ 1.12
TNFRSF1A-201ENST00000162749 ENOX1Q8TC92 643 aaKnown RBP22.02■■□□□ 1.12
TNFRSF1A-201ENST00000162749 ZNF577Q9BSK1 485 aa22.02■■□□□ 1.12
TNFRSF1A-201ENST00000162749 KCNH7Q9NS40 1196 aa22.02■■□□□ 1.12
TNFRSF1A-201ENST00000162749 BTBD7Q9P203 1132 aa22.02■■□□□ 1.12
TNFRSF1A-201ENST00000162749 PYCARDQ9ULZ3 195 aa22.02■■□□□ 1.12
TNFRSF1A-201ENST00000162749 MYMKA6NI61 221 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 IPO5O00410 1097 aaKnown RBP22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 EML1O00423 815 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 SPATA31C1P0DKV0 1188 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 PTGS1P23219 599 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 GJA5P36382 358 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 IRX3P78415 501 aaPredicted RBP22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 PPP2R5CQ13362 524 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 KLHL10Q6JEL2 608 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 MB21D1Q8N884 522 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 KIAA1524Q8TCG1 905 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 WDR11Q9BZH6 1224 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 ASCC2Q9H1I8 757 aaPredicted RBP22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 FANCLQ9NW38 375 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 NRBP1Q9UHY1 535 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 GDAQ9Y2T3 454 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 UBIAD1Q9Y5Z9 338 aa22.02■■□□□ 1.11
TNFRSF1A-201ENST00000162749 WDR81Q562E7 1941 aa22.01■■□□□ 1.11
TNFRSF1A-201ENST00000162749 POTEFA5A3E0 1075 aa22.01■■□□□ 1.11
TNFRSF1A-201ENST00000162749 GAS7O60861 476 aa22.01■■□□□ 1.11
TNFRSF1A-201ENST00000162749 ATP1A3P13637 1013 aa22.01■■□□□ 1.11
TNFRSF1A-201ENST00000162749 ASIC1P78348 528 aa22.01■■□□□ 1.11
TNFRSF1A-201ENST00000162749 SEMA3FQ13275 785 aa22.01■■□□□ 1.11
TNFRSF1A-201ENST00000162749 POTEGQ6S5H5 508 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms