RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Gas7Q60780 421 aa17.12■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Secisbp2lQ6A098 1086 aaKnown RBP17.12■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Smarca1Q6PGB8 1046 aa17.12■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Tmc3Q7TQ69 1130 aa17.12■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Ireb2Q811J3 963 aaKnown RBP17.12■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Serpinb13Q8CDC0 389 aa17.12■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Fsip1Q9D3V5 435 aa17.12■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Chaf1aQ9QWF0 911 aa17.12■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Gm38392E9Q2A2 434 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Pla2g6P97819 807 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Pbxip1Q3TVI8 727 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Kmt2eQ3UG20 1868 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Fdxacb1Q3UY23 622 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Olfr121Q5CZY0 321 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Cdc37Q61081 379 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Tmem63cQ8CBX0 802 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Apol10aQ8CCA5 318 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Exoc1Q8R3S6 894 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Dqx1Q924H9 718 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Bco2Q99NF1 532 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Ccdc105Q9D4K7 499 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Serpinb12Q9D7P9 423 aa17.11■□□□□ 0.33
Ldb3-208ENSMUST00000228044 PhipQ8VDD9 1821 aaKnown RBP17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Hoxc10P31257 342 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Hoxc13P50207 328 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 YdjcQ14BV6 310 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Slc10a4Q3UEZ8 437 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Gpr162Q3UN16 588 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Znf652Q5DU09 608 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Tfe3Q64092 572 aaKnown RBP17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Abcf1Q6P542 837 aaKnown RBP17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Trpv1Q704Y3 839 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Rexo1Q7TT28 1213 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Slc17a8Q8BFU8 601 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Psmd2Q8VDM4 908 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Mical1Q8VDP3 1048 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Rab3il1Q8VDV3 383 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Slc25a38Q91XD8 326 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 PccaQ91ZA3 724 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Smchd1Q6P5D8 2007 aaKnown RBP17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 JcadQ5DTX6 1320 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Krt36B1AQ75 473 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 FlgP11088 336 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Rit2P70425 217 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 4933427I04RikQ3V053 235 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Tbx2Q60707 711 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Ccz1Q8C1Y8 480 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Nemp2Q8CB65 421 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Sulf1Q8K007 870 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Syce1Q9D495 329 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Kcnh7Q9ER47 1195 aa17.1■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Pus7B7ZNL8 666 aaKnown RBP17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Gm5934D3Z4U6 212 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Ccdc78D3Z5T1 437 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Orc4O88708 433 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Sox5P35710 763 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Irf5P56477 497 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Pstpip1P97814 415 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Specc1lQ2KN98 1118 aaKnown RBP17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Tnfaip8l3Q3TBL6 204 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Ttll12Q3UDE2 639 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Nab2Q61127 525 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Adgre1Q61549 931 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Trak2Q6P9N8 913 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Usp17leQ7M764 540 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Ercc6lQ8BHK9 1240 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Pcdha7Q91Y13 937 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Rassf3Q99P51 232 aa17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 RnmtQ9D0L8 465 aaKnown RBP17.09■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Arhgap6O54834 987 aa17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Abcb4P21440 1276 aa17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Pbx1P41778 430 aa17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Lrrc55Q3UY51 311 aa17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Gzf1Q4VBD9 706 aa17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Ankrd40Q5SUE8 363 aa17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Supt20hQ7TT00 530 aaKnown RBP17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Trim47Q8C0E3 641 aa17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Tbc1d10cQ8C9V1 444 aa17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Slc12a8Q8VI23 705 aa17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Rfc4Q99J62 364 aa17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Med24Q99K74 987 aa17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Mrvi1Q9WUX5 899 aaKnown RBP17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 S1pr4Q9Z0L1 386 aa17.08■□□□□ 0.33
Ldb3-208ENSMUST00000228044 Apol10bG3X9K7 334 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Gm4758L7N258 96 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Dhx15O35286 795 aaKnown RBP17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Tal1P22091 329 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Anks1aP59672 1150 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Neurl1bQ0MW30 546 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Otud5Q3U2S4 566 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Atg4cQ811C2 458 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Vmn1r199Q8R280 367 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Ero1bQ8R2E9 467 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Mtmr6Q8VE11 617 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Haus2Q9CQS9 234 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Copb1Q9JIF7 953 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Pgap3A2A559 320 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Trappc11B2RXC1 1133 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Ric8aQ3TIR3 530 aa17.07■□□□□ 0.32
Ldb3-208ENSMUST00000228044 Ddx49Q4FZF3 480 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms