RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Gm7138L7N2C3 230 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Gas2P11862 314 aaKnown RBP8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Hrh1P70174 488 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Zfp51Q3U4L8 781 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Mctp2Q5RJH2 878 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Nlrp9bQ66X22 1003 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Ankle2Q6P1H6 964 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Ddx58Q6Q899 926 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Casc1Q6TDU8 730 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Ptrh1Q8BW00 204 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Fsd2Q8BZ52 692 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Srek1Q8BZX4 494 aaKnown RBP8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Tshz3Q8CGV9 1081 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Rbm17Q8JZX4 405 aaKnown RBP8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 FbrsQ8R089 466 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Plekhg6Q8R0J1 787 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Krt25Q8VCW2 446 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Gimap3Q99MI6 301 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Isl2Q9CXV0 359 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Ampd2Q9DBT5 798 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 TefQ9JLC6 301 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Stk11Q9WTK7 436 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Ak2Q9WTP6 239 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Gm3238W4VSP7 230 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Szt2A2A9C3 3431 aa8.31□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 BcorQ8CGN4 1759 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Rbm8a2A0A0N4SUH6 174 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Pramel3A2AHA7 463 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Gm7903A2AWL1 463 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Tnnt1O88346 262 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Dnmt3aO88508 908 aaKnown RBP8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Q3UZV7 1028 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Slain1Q68FF7 579 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Zscan22Q8BGS5 496 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Usp1Q8BJQ2 784 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Tmem67Q8BR76 992 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Zfp113Q8C689 439 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 TirapQ99JY1 241 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Trim34aQ99PP6 485 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Rbm8aQ9CWZ3 174 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Telo2Q9DC40 840 aaKnown RBP8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 EtfbQ9DCW4 255 aaKnown RBP8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Prg3Q9JL95 222 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Dnaja2Q9QYJ0 412 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Foxo3Q9WVH4 672 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Gdf11Q9Z1W4 405 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Col11a1Q61245 1804 aa8.3□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Znf609Q8BZ47 1413 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Arap2Q8BZ05 1703 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Dlg5E9Q9R9 1921 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 NpwA0A1L1STR8 176 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 TrdnE9Q9K5 693 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Atf6F6VAN0 656 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 MecomP14404 1042 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Cfap157Q0VFX2 523 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Hvcn1Q3U2S8 269 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Mindy4Q3UQI9 744 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Gas2l3Q3UWW6 683 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Gnat3Q3V3I2 354 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Cep44Q5HZK1 386 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Rtp3Q5QGU6 474 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Leo1Q5XJE5 667 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Cnot7Q60809 285 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Ppp4r3aQ6P2K6 820 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Itln1bQ80ZA0 313 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Susd4Q8BH32 490 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Rps6kb1Q8BSK8 525 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Etf1Q8BWY3 437 aaKnown RBP8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Nek11Q8C0Q4 628 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 ItchQ8C863 864 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 E4f1Q8CCE9 783 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Nup88Q8CEC0 753 aaKnown RBP8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Slc26a8Q8R0C3 999 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Gtf3c5Q8R2T8 520 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Nlrp3Q8R4B8 1033 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Eps8l3Q91WL0 600 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 StrbpQ91WM1 672 aaKnown RBP8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Znf281Q99LI5 893 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Lmbr1lQ9D1E5 489 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Erich6bQ9D4S6 220 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Mss51Q9D5Z5 446 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Myo3bQ1EG27 1305 aa8.29□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Atp2b1G5E829 1220 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Pa2g4P50580 394 aaKnown RBP8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Timm13P62075 95 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 NyxP83503 476 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Bach2P97303 839 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Lrig2Q52KR2 1054 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Tmem151aQ6GQT5 468 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Nap1l3Q794H2 544 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Nrde2Q80XC6 1172 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Gm9913Q8BQQ2 135 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Zbtb9Q8CDC7 459 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Trim52Q8CDV4 233 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Pnma3Q8JZW8 466 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Snap47Q8R570 413 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Vmn1r42Q8VBS7 329 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Vmn1r43Q8VIC9 329 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Bloc1s2Q9CWG9 143 aa8.28□□□□□ -1.08
Ccdc47-202ENSMUST00000106865 Ppil4Q9CXG3 492 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 102.4 ms