RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Hnrnpul1Q8VDM6 859 aaKnown RBP16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Slc25a38Q91XD8 326 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Hic1Q9R1Y5 733 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Usp34Q6ZQ93 3582 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Astn1Q61137 1302 aa16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Wdr33Q8K4P0 1330 aaKnown RBP16.53■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Acad12D3Z7X0 555 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Akr1c19G3X9Y6 323 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Vmn2r71L7N2D8 855 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Timm44O35857 452 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Msh3P13705 1091 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 SsbP32067 415 aaKnown RBP16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Cfap52Q5F201 620 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Antxr2Q6DFX2 487 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Cdkn2aipQ8BI72 563 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Dpp9Q8BVG4 862 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Nemp2Q8CB65 421 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Bcas3Q8CCN5 928 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Pdlim2Q8R1G6 349 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Snx29Q9D3S3 818 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 PycardQ9EPB4 193 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Znf704Q9ERQ3 566 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 PdcQ9QW08 244 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Ggps1Q9WTN0 300 aa16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Mrvi1Q9WUX5 899 aaKnown RBP16.52■□□□□ 0.24
Ercc1-201ENSMUST00000003645 Prom1O54990 867 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Krt18P05784 423 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Nf2P46662 596 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Ly9Q01965 654 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 YdjcQ14BV6 310 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Gas2l3Q3UWW6 683 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Epha7Q61772 998 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 GypcQ78HU7 95 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Trim47Q8C0E3 641 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 PdgfcQ8CI19 345 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Kcnc4Q8R1C0 628 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Ddx41Q91VN6 622 aaKnown RBP16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Nxf1Q99JX7 618 aaKnown RBP16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Adgrf4Q9D2L6 698 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Nap1l5Q9JJF0 156 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Kif4P33174 1231 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Setd4P58467 439 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Lmntd2Q0VET5 664 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Slc2a13Q3UHK1 637 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Specc1Q5SXY1 1067 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 RragbQ6NTA4 374 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Trak2Q6P9N8 913 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Pcdhb15Q91Y04 786 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Rpap3Q9D706 660 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Dusp10Q9ESS0 483 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Ripk3Q9QZL0 486 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Stxbp4Q9WV89 557 aa16.51■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Zscan29E9Q5B4 869 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Gml2G5E8L7 176 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Pgk2P09041 417 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Syt2P46097 422 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Psmc2P46471 433 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Rrp1P56183 494 aaKnown RBP16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Pcmtd1P59913 357 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 StamP70297 548 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Atp9bP98195 1146 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Zfp90Q61967 636 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Cdc14aQ6GQT0 603 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Clic6Q8BHB9 596 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Osbpl2Q8BX94 484 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Q91WD4 421 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Hdhd5Q91WM2 419 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Krt82Q99M74 516 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Dis3Q9CSH3 958 aaKnown RBP16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Krtap5-3Q9D226 196 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Spint1Q9R097 507 aa16.5■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Ccdc88cQ6VGS5 2009 aa16.49■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Sycp2lA0A0M3U1B0 842 aa16.49■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Krt28A6BLY7 462 aa16.49■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Lrrc14bQ3UJB3 510 aa16.49■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Islr2Q5RKR3 745 aa16.49■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Hook1Q8BIL5 728 aa16.49■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Btbd7Q8CFE5 1130 aa16.49■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Washc1Q8VDD8 475 aa16.49■□□□□ 0.23
Ercc1-201ENSMUST00000003645 TnmdQ9EP64 317 aa16.49■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Sh3bgrQ9WUZ7 214 aa16.49■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Lamb2Q61292 1799 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 EdnrbP48302 442 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Lpar1P61793 364 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 PrkczQ02956 592 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Gpatch11Q3UFS4 262 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Zfp957Q3UT76 567 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Fam189a2Q4FZH1 290 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Rapgefl1Q68EF8 662 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 VwdeQ6DFV8 926 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Krt9Q6RHW0 743 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Cyfip1Q7TMB8 1253 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Tmc3Q7TQ69 1130 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Cep120Q7TSG1 988 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Aoc2Q812C9 757 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Thap3Q8BJ25 218 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Nek9Q8K1R7 984 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Krt79Q8VED5 531 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Dph6Q9CQ28 267 aa16.48■□□□□ 0.23
Ercc1-201ENSMUST00000003645 Plcb1Q9Z1B3 1216 aa16.48■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms