RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	PAH1	P32567	862 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	GLC7	P32598	312 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	UTR4	P32626	227 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	COX13	P32799	129 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	YBR144C	P34215	104 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	STB6	P36085	766 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	MRPS9	P38120	278 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	RIB5	P38145	238 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	DUG2	P38149	878 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	YHR210C	P38893	341 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	YEL057C	P39983	233 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	PAN6	P40459	309 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	TMA108	P40462	946 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	DPH1	P40487	425 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	MAM33	P40513	266 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	DOT5	P40553	215 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	YJR008W	P47085	338 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	IMD4	P50094	524 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	DRN1	P53255	507 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	MEP3	P53390	489 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	NCS2	P53923	493 aa	Predicted RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	MTQ1	P53944	314 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	DIA1	P54005	336 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	KTR6	P54070	446 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	RPT6	Q01939	405 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	YSA1	Q01976	231 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	TOF2	Q02208	771 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	PNG1	Q02890	363 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	BNA5	Q05979	453 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	TFC6	Q06339	672 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	DIS3	Q08162	1001 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	RCN2	Q12044	265 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	PKH2	Q12236	1081 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	ERV2	Q12284	196 aa		0.39	□□□□□ -2.35
RCO1	YMR075W	WTM1	Q12363	437 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	NOP58	Q12499	511 aa	Known RBP	0.39	□□□□□ -2.35
RCO1	YMR075W	SUC2	P00724	532 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	HIS4	P00815	799 aa	Known RBP	0.38	□□□□□ -2.35
RCO1	YMR075W	ARG4	P04076	463 aa	Predicted RBP	0.38	□□□□□ -2.35
RCO1	YMR075W	RHO2	P06781	192 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	COR1	P07256	457 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	RPI1	P23250	407 aa	Known RBP	0.38	□□□□□ -2.35
RCO1	YMR075W	YCR100C	P25606	316 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	POP5	P28005	173 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	SSE2	P32590	693 aa	Known RBP	0.38	□□□□□ -2.35
RCO1	YMR075W	MUD1	P32605	298 aa	Known RBP	0.38	□□□□□ -2.35
RCO1	YMR075W	IES6	P32617	166 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	MNS1	P32906	549 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	YCR041W	P37265	110 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	NOP4	P37838	685 aa	Known RBP	0.38	□□□□□ -2.35
RCO1	YMR075W	TCM62	P38228	572 aa	Known RBP	0.38	□□□□□ -2.35
RCO1	YMR075W	VID24	P38263	362 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	MSR1	P38714	643 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	ERP2	P39704	215 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	PRM5	P40476	318 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	YIL029C	P40538	142 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	GCD10	P41814	478 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	YFR057W	P43625	151 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	AIM22	P47051	409 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	ECM27	P47144	725 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	OCA1	P50946	238 aa	Predicted RBP	0.38	□□□□□ -2.35
RCO1	YMR075W	YGR021W	P53212	290 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	RSN1	Q03516	953 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	YDR239C	Q03780	787 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	RBS1	Q05672	457 aa	Known RBP	0.38	□□□□□ -2.35
RCO1	YMR075W	YLR345W	Q06137	509 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	OPY2	Q06810	360 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	YOR365C	Q08844	703 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	YPQ1	Q12010	308 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	NCE102	Q12207	173 aa	RIP-Chip data	0.38	□□□□□ -2.35	not detected
RCO1	YMR075W	HSP42	Q12329	375 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	HMS1	Q12398	434 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	ENT1	Q12518	454 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	FOL3	Q12676	427 aa	Predicted RBP	0.38	□□□□□ -2.35
RCO1	YMR075W	YOL087C	Q99247	1116 aa		0.38	□□□□□ -2.35
RCO1	YMR075W	FOB1	O13329	566 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	TRP1	P00912	224 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	TEF1	P02994	458 aa	Known RBP	0.37	□□□□□ -2.35
RCO1	YMR075W	GAL80	P04387	435 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	SPS4	P09937	338 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	ASP3-2	P0CX77	362 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	ASP3-3	P0CX78	362 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	ASP3-4	P0CX79	362 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	ASP3-1	P0CZ17	362 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.37	□□□□□ -2.35	not detected
RCO1	YMR075W	GLK1	P17709	500 aa	Known RBP	0.37	□□□□□ -2.35
RCO1	YMR075W	REC107	P21651	314 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	SLY1	P22213	666 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	YCK1	P23291	538 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	BUB3	P26449	341 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	RAD14	P28519	371 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	SSH4	P32343	579 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	ATP11	P32453	318 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	APE2	P32454	952 aa	Known RBP	0.37	□□□□□ -2.35
RCO1	YMR075W	RML2	P32611	393 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	GYP6	P32806	458 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	MFT1	P33441	392 aa	Known RBP	0.37	□□□□□ -2.35
RCO1	YMR075W	ATP3	P38077	311 aa	Known RBP	0.37	□□□□□ -2.35
RCO1	YMR075W	CST26	P38226	397 aa		0.37	□□□□□ -2.35
RCO1	YMR075W	MSG5	P38590	489 aa		0.37	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms