RNA–Protein interactions for RNA: YKL193C

SDS22, Transcript of Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p, yeast

Gene SDS22, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS22	YKL193C	SEC66	P33754	206 aa		3.01	□□□□□ -1.93
SDS22	YKL193C	CMC1	P36064	111 aa		3.01	□□□□□ -1.93
SDS22	YKL193C	ISC1	P40015	477 aa	Known RBP	3.01	□□□□□ -1.93
SDS22	YKL193C	YIL067C	P40514	678 aa		3.01	□□□□□ -1.93
SDS22	YKL193C	YOR387C	Q08910	206 aa		3.01	□□□□□ -1.93
SDS22	YKL193C	HEM15	P16622	393 aa		3	□□□□□ -1.93
SDS22	YKL193C	PMT1	P33775	817 aa		3	□□□□□ -1.93
SDS22	YKL193C	YGL242C	P53066	181 aa		3	□□□□□ -1.93
SDS22	YKL193C	POP6	P53218	158 aa		3	□□□□□ -1.93
SDS22	YKL193C	OGG1	P53397	376 aa	Predicted RBP	3	□□□□□ -1.93
SDS22	YKL193C	JJJ1	P53863	590 aa		3	□□□□□ -1.93
SDS22	YKL193C	THP3	Q12049	470 aa	Known RBP	3	□□□□□ -1.93
SDS22	YKL193C	SPT15	P13393	240 aa	Known RBP	2.99	□□□□□ -1.93
SDS22	YKL193C	ATP10	P18496	279 aa		2.99	□□□□□ -1.93
SDS22	YKL193C	SPB1	P25582	841 aa	Predicted RBP	2.99	□□□□□ -1.93
SDS22	YKL193C	NAM9	P27929	486 aa		2.99	□□□□□ -1.93
SDS22	YKL193C	CRM1	P30822	1084 aa	Known RBP	2.99	□□□□□ -1.93
SDS22	YKL193C	CBP4	P37267	147 aa		2.99	□□□□□ -1.93
SDS22	YKL193C	THI2	P38141	450 aa		2.99	□□□□□ -1.93
SDS22	YKL193C	VID24	P38263	362 aa		2.99	□□□□□ -1.93
SDS22	YKL193C	VMA13	P41807	478 aa	Known RBP	2.99	□□□□□ -1.93
SDS22	YKL193C	HXT14	P42833	540 aa		2.99	□□□□□ -1.93
SDS22	YKL193C	TRS85	P46944	698 aa		2.99	□□□□□ -1.93
SDS22	YKL193C	SOV1	Q04748	898 aa		2.99	□□□□□ -1.93
SDS22	YKL193C	ERV2	Q12284	196 aa		2.99	□□□□□ -1.93
SDS22	YKL193C	RRP12	Q12754	1228 aa	Known RBP	2.99	□□□□□ -1.93
SDS22	YKL193C	YAR066W	P0CX18	203 aa		2.98	□□□□□ -1.93
SDS22	YKL193C	YHR214W	P0CX19	203 aa		2.98	□□□□□ -1.93
SDS22	YKL193C	YCR100C	P25606	316 aa		2.98	□□□□□ -1.93
SDS22	YKL193C	DEG1	P31115	442 aa	Known RBP	2.98	□□□□□ -1.93
SDS22	YKL193C	AFG1	P32317	509 aa		2.98	□□□□□ -1.93
SDS22	YKL193C	NAT2	P37293	288 aa		2.98	□□□□□ -1.93
SDS22	YKL193C	NDT80	P38830	627 aa		2.98	□□□□□ -1.93
SDS22	YKL193C	YGR149W	P48236	432 aa		2.98	□□□□□ -1.93
SDS22	YKL193C	ELP3	Q02908	557 aa	Known RBP	2.98	□□□□□ -1.93
SDS22	YKL193C	ODC1	Q03028	310 aa		2.98	□□□□□ -1.93
SDS22	YKL193C	PBA1	Q05778	276 aa		2.98	□□□□□ -1.93
SDS22	YKL193C	ESA1	Q08649	445 aa		2.98	□□□□□ -1.93
SDS22	YKL193C	RIM20	Q12033	661 aa		2.98	□□□□□ -1.93
SDS22	YKL193C	MET17	P06106	444 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	RHO2	P06781	192 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	MRP7	P12687	371 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	CPR4	P25334	318 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	IDH2	P28241	369 aa	Known RBP	2.97	□□□□□ -1.93
SDS22	YKL193C	RAD14	P28519	371 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	YIM1	P28625	365 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	YBL059W	P34224	193 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	YCR041W	P37265	110 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	ARF3	P40994	183 aa	RIP-Chip data	2.97	□□□□□ -1.93	not detected
SDS22	YKL193C	YFL067W	P43537	175 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	IRC6	P43615	237 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	PNG1	Q02890	363 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	RQC1	Q05468	723 aa	Known RBP	2.97	□□□□□ -1.93
SDS22	YKL193C	TMS1	Q12116	473 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	GRX6	Q12438	231 aa		2.97	□□□□□ -1.93
SDS22	YKL193C	SAM1	P10659	382 aa	Known RBP	2.96	□□□□□ -1.94
SDS22	YKL193C	SAM2	P19358	384 aa	Known RBP	2.96	□□□□□ -1.94
SDS22	YKL193C	CCT2	P39076	527 aa	Known RBP	2.96	□□□□□ -1.94
SDS22	YKL193C	ESL1	P40456	1118 aa		2.96	□□□□□ -1.94
SDS22	YKL193C	TFG2	P41896	400 aa	Predicted RBP	2.96	□□□□□ -1.94
SDS22	YKL193C	IBD2	P53892	351 aa		2.96	□□□□□ -1.94
SDS22	YKL193C	RRN11	Q04712	507 aa		2.96	□□□□□ -1.94
SDS22	YKL193C	HEL2	Q05580	639 aa	Known RBP	2.96	□□□□□ -1.94
SDS22	YKL193C	MRPL35	Q06678	367 aa		2.96	□□□□□ -1.94
SDS22	YKL193C	YPL199C	Q08954	240 aa		2.96	□□□□□ -1.94
SDS22	YKL193C	YLR278C	Q05854	1341 aa		2.95	□□□□□ -1.94
SDS22	YKL193C	HHF1	P02309	103 aa	Known RBP	2.95	□□□□□ -1.94
SDS22	YKL193C	TOP1	P04786	769 aa		2.95	□□□□□ -1.94
SDS22	YKL193C	ROX1	P25042	368 aa		2.95	□□□□□ -1.94
SDS22	YKL193C	GYP6	P32806	458 aa		2.95	□□□□□ -1.94
SDS22	YKL193C	NIP100	P33420	868 aa		2.95	□□□□□ -1.94
SDS22	YKL193C	UTP9	P38882	575 aa	Known RBP	2.95	□□□□□ -1.94
SDS22	YKL193C	SMF1	P38925	575 aa		2.95	□□□□□ -1.94
SDS22	YKL193C	OST1	P41543	476 aa	Known RBP	2.95	□□□□□ -1.94
SDS22	YKL193C	YIP1	P53039	248 aa		2.95	□□□□□ -1.94
SDS22	YKL193C	RMD9	P53140	646 aa	Known RBP	2.95	□□□□□ -1.94
SDS22	YKL193C	PCP1	P53259	346 aa		2.95	□□□□□ -1.94
SDS22	YKL193C	GOR1	P53839	350 aa		2.95	□□□□□ -1.94
SDS22	YKL193C	NCS2	P53923	493 aa	Predicted RBP	2.95	□□□□□ -1.94
SDS22	YKL193C	MRP51	Q02950	344 aa		2.95	□□□□□ -1.94
SDS22	YKL193C	SPS4	P09937	338 aa		2.94	□□□□□ -1.94
SDS22	YKL193C	CKA1	P15790	372 aa		2.94	□□□□□ -1.94
SDS22	YKL193C	PPH22	P23595	377 aa		2.94	□□□□□ -1.94
SDS22	YKL193C	HXT3	P32466	567 aa	Known RBP	2.94	□□□□□ -1.94
SDS22	YKL193C	PRP21	P32524	280 aa	Predicted RBP	2.94	□□□□□ -1.94
SDS22	YKL193C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
SDS22	YKL193C	MIX23	P38162	196 aa		2.94	□□□□□ -1.94
SDS22	YKL193C	NDE1	P40215	560 aa		2.94	□□□□□ -1.94
SDS22	YKL193C	PRE5	P40302	234 aa	Known RBP	2.94	□□□□□ -1.94
SDS22	YKL193C	YGR210C	P42942	411 aa		2.94	□□□□□ -1.94
SDS22	YKL193C	BTN2	P53286	410 aa		2.94	□□□□□ -1.94
SDS22	YKL193C	TOF1	P53840	1238 aa		2.94	□□□□□ -1.94
SDS22	YKL193C	MRPL19	P53875	158 aa		2.94	□□□□□ -1.94
SDS22	YKL193C	TSR1	Q07381	788 aa	Known RBP	2.94	□□□□□ -1.94
SDS22	YKL193C	YLR108C	Q12259	485 aa		2.94	□□□□□ -1.94
SDS22	YKL193C	RPL3	P14126	387 aa	Known RBP	2.93	□□□□□ -1.94
SDS22	YKL193C	YEL045C	P32616	141 aa		2.93	□□□□□ -1.94
SDS22	YKL193C	REC114	P32841	428 aa		2.93	□□□□□ -1.94
SDS22	YKL193C	MST28	P39552	234 aa		2.93	□□□□□ -1.94
SDS22	YKL193C	REE1	P40893	198 aa		2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms