RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W PAR32Q12515 295 aaKnown RBP2.11□□□□□ -2.07
SMD1YGR074W PDE2P06776 526 aa2.1□□□□□ -2.07
SMD1YGR074W SGV1P23293 657 aaKnown RBP2.1□□□□□ -2.07
SMD1YGR074W YCP4P25349 247 aaKnown RBP2.1□□□□□ -2.07
SMD1YGR074W YCR007CP25354 239 aa2.1□□□□□ -2.07
SMD1YGR074W RHB1P25378 209 aa2.1□□□□□ -2.07
SMD1YGR074W BEM1P29366 551 aa2.1□□□□□ -2.07
SMD1YGR074W ERG1P32476 496 aaKnown RBP2.1□□□□□ -2.07
SMD1YGR074W VPH1P32563 840 aaKnown RBP2.1□□□□□ -2.07
SMD1YGR074W ECM32P32644 1121 aaKnown RBP2.1□□□□□ -2.07
SMD1YGR074W LTV1P34078 463 aa2.1□□□□□ -2.07
SMD1YGR074W ECM15P35195 104 aa2.1□□□□□ -2.07
SMD1YGR074W PIM1P36775 1133 aa2.1□□□□□ -2.07
SMD1YGR074W THI2P38141 450 aa2.1□□□□□ -2.07
SMD1YGR074W SLM4P38247 162 aa2.1□□□□□ -2.07
SMD1YGR074W GND1P38720 489 aaKnown RBP2.1□□□□□ -2.07
SMD1YGR074W CCT4P39078 528 aaKnown RBP2.1□□□□□ -2.07
SMD1YGR074W SCD6P45978 349 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
SMD1YGR074W TCB2P48231 1178 aa2.1□□□□□ -2.07
SMD1YGR074W YIF1P53845 314 aaKnown RBP2.1□□□□□ -2.07
SMD1YGR074W EOS1P53938 366 aa2.1□□□□□ -2.07
SMD1YGR074W SLG1P54867 378 aa2.1□□□□□ -2.07
SMD1YGR074W PEX25Q02969 394 aa2.1□□□□□ -2.07
SMD1YGR074W GIP3Q03016 1276 aa2.1□□□□□ -2.07
SMD1YGR074W DIG1Q03063 452 aaKnown RBP2.1□□□□□ -2.07
SMD1YGR074W SLD5Q03406 294 aa2.1□□□□□ -2.07
SMD1YGR074W ACL4Q03771 387 aa2.1□□□□□ -2.07
SMD1YGR074W YDR387CQ04162 555 aa2.1□□□□□ -2.07
SMD1YGR074W FMP42Q04991 504 aa2.1□□□□□ -2.07
SMD1YGR074W MRPL51Q06090 140 aaPredicted RBP2.1□□□□□ -2.07
SMD1YGR074W DCS1Q06151 350 aa2.1□□□□□ -2.07
SMD1YGR074W MLH2Q07980 695 aa2.1□□□□□ -2.07
SMD1YGR074W APL5Q08951 932 aaKnown RBP2.1□□□□□ -2.07
SMD1YGR074W SPE3Q12074 293 aaKnown RBP2.1□□□□□ -2.07
SMD1YGR074W YLR278CQ05854 1341 aa2.1□□□□□ -2.07
SMD1YGR074W SUC2P00724 532 aa2.09□□□□□ -2.07
SMD1YGR074W RPL6BP05739 176 aaKnown RBP2.09□□□□□ -2.07
SMD1YGR074W YAR066WP0CX18 203 aa2.09□□□□□ -2.07
SMD1YGR074W YHR214WP0CX19 203 aa2.09□□□□□ -2.07
SMD1YGR074W GLK1P17709 500 aaKnown RBP2.09□□□□□ -2.07
SMD1YGR074W CLN1P20437 546 aa2.09□□□□□ -2.07
SMD1YGR074W RPI1P23250 407 aaKnown RBP2.09□□□□□ -2.07
SMD1YGR074W KRE2P27809 442 aa2.09□□□□□ -2.07
SMD1YGR074W CRM1P30822 1084 aaKnown RBP2.09□□□□□ -2.07
SMD1YGR074W ATP11P32453 318 aa2.09□□□□□ -2.07
SMD1YGR074W APE2P32454 952 aaKnown RBP2.09□□□□□ -2.07
SMD1YGR074W HIR2P32480 875 aa2.09□□□□□ -2.07
SMD1YGR074W PRP21P32524 280 aaPredicted RBP2.09□□□□□ -2.07
SMD1YGR074W ATO2P32907 282 aa2.09□□□□□ -2.07
SMD1YGR074W SPC34P36131 295 aa2.09□□□□□ -2.07
SMD1YGR074W RXT2P38255 430 aa2.09□□□□□ -2.07
SMD1YGR074W GDT1P38301 280 aaPredicted RBP2.09□□□□□ -2.07
SMD1YGR074W APE4P38821 490 aa2.09□□□□□ -2.07
SMD1YGR074W MET30P39014 640 aa2.09□□□□□ -2.07
SMD1YGR074W YER130CP39959 443 aa2.09□□□□□ -2.07
SMD1YGR074W ISC1P40015 477 aaKnown RBP2.09□□□□□ -2.07
SMD1YGR074W YIL169CP40442 995 aa2.09□□□□□ -2.07
SMD1YGR074W SYG1P40528 902 aa2.09□□□□□ -2.07
SMD1YGR074W DIM1P41819 318 aaKnown RBP2.09□□□□□ -2.07
SMD1YGR074W TFG2P41896 400 aaPredicted RBP2.09□□□□□ -2.07
SMD1YGR074W ATP22P50273 684 aaPredicted RBP2.09□□□□□ -2.07
SMD1YGR074W PIB2P53191 635 aa2.09□□□□□ -2.07
SMD1YGR074W RPT4P53549 437 aaKnown RBP2.09□□□□□ -2.07
SMD1YGR074W GIS2P53849 153 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
SMD1YGR074W RPL6AQ02326 176 aaKnown RBP2.09□□□□□ -2.07
SMD1YGR074W YMR034CQ05131 434 aaPredicted RBP2.09□□□□□ -2.07
SMD1YGR074W MMR1Q06324 491 aa2.09□□□□□ -2.07
SMD1YGR074W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
SMD1YGR074W THI20Q08224 551 aa2.09□□□□□ -2.07
SMD1YGR074W MUM3Q08750 479 aa2.09□□□□□ -2.07
SMD1YGR074W BSC1Q12140 328 aa2.09□□□□□ -2.07
SMD1YGR074W BUG1Q12191 341 aa2.09□□□□□ -2.07
SMD1YGR074W YDL009CQ12210 107 aa2.09□□□□□ -2.07
SMD1YGR074W CSR2Q12734 1121 aa2.09□□□□□ -2.07
SMD1YGR074W MTR10Q99189 972 aa2.09□□□□□ -2.07
SMD1YGR074W HIS4P00815 799 aaKnown RBP2.08□□□□□ -2.08
SMD1YGR074W RIP1P08067 215 aa2.08□□□□□ -2.08
SMD1YGR074W PMR1P13586 950 aa2.08□□□□□ -2.08
SMD1YGR074W GLN3P18494 730 aa2.08□□□□□ -2.08
SMD1YGR074W RPS2P25443 254 aaKnown RBP2.08□□□□□ -2.08
SMD1YGR074W FRE1P32791 686 aa2.08□□□□□ -2.08
SMD1YGR074W PTR2P32901 601 aa2.08□□□□□ -2.08
SMD1YGR074W SWH1P35845 1188 aa2.08□□□□□ -2.08
SMD1YGR074W FRE2P36033 711 aa2.08□□□□□ -2.08
SMD1YGR074W RIM2P38127 377 aa2.08□□□□□ -2.08
SMD1YGR074W ARC40P38328 384 aaKnown RBP2.08□□□□□ -2.08
SMD1YGR074W WSS1P38838 269 aa2.08□□□□□ -2.08
SMD1YGR074W FAU1P40099 211 aa2.08□□□□□ -2.08
SMD1YGR074W YJL132WP47014 750 aa2.08□□□□□ -2.08
SMD1YGR074W YJR011CP47086 261 aaPredicted RBP2.08□□□□□ -2.08
SMD1YGR074W ECM27P47144 725 aa2.08□□□□□ -2.08
SMD1YGR074W PNG1Q02890 363 aa2.08□□□□□ -2.08
SMD1YGR074W GRS2Q06817 618 aa2.08□□□□□ -2.08
SMD1YGR074W SYO1Q07395 620 aa2.08□□□□□ -2.08
SMD1YGR074W RPN5Q12250 445 aaKnown RBP2.08□□□□□ -2.08
SMD1YGR074W YDR061WQ12298 539 aa2.08□□□□□ -2.08
SMD1YGR074W ISN1Q99312 450 aa2.08□□□□□ -2.08
SMD1YGR074W TY1B-AO13527 1196 aaKnown RBP2.07□□□□□ -2.08
SMD1YGR074W CYB2P00175 591 aa2.07□□□□□ -2.08
SMD1YGR074W LPD1P09624 499 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms