RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC1, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC1	YDR177W	RPS10A	Q08745	105 aa	Predicted RBP	4.62	□□□□□ -1.67
UBC1	YDR177W	SCEI	P03882	235 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	CDC37	P06101	506 aa	Known RBP	4.61	□□□□□ -1.67
UBC1	YDR177W	LEU4	P06208	619 aa	Known RBP	4.61	□□□□□ -1.67
UBC1	YDR177W	CHO1	P08456	276 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	PEP5	P12868	1029 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	TYR1	P20049	452 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	DBP3	P20447	523 aa	Known RBP	4.61	□□□□□ -1.67
UBC1	YDR177W	SIN4	P32259	974 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	IME2	P32581	645 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	RRN10	P38204	145 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	EXO1	P39875	702 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	YMR147W	P40218	223 aa	Known RBP	4.61	□□□□□ -1.67
UBC1	YDR177W	TFG2	P41896	400 aa	Predicted RBP	4.61	□□□□□ -1.67
UBC1	YDR177W	LYS20	P48570	428 aa	Known RBP	4.61	□□□□□ -1.67
UBC1	YDR177W	MPS2	P53159	387 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	DSL1	P53847	754 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	TMN2	Q04562	672 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	ULA1	Q12059	462 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	BUD4	P47136	1447 aa		4.61	□□□□□ -1.67
UBC1	YDR177W	ALG1	P16661	449 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	ATP10	P18496	279 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	NUP1	P20676	1076 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	GSY2	P27472	705 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	TCM62	P38228	572 aa	Known RBP	4.6	□□□□□ -1.67
UBC1	YDR177W	LAG1	P38703	411 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	PAC11	P40960	533 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	CIN1	P40987	1014 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	YFR018C	P43599	363 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	AIP1	P46680	615 aa	Known RBP	4.6	□□□□□ -1.67
UBC1	YDR177W	RPS10B	P46784	105 aa	Known RBP	4.6	□□□□□ -1.67
UBC1	YDR177W	PYK2	P52489	506 aa	Known RBP	4.6	□□□□□ -1.67
UBC1	YDR177W	YIP5	P53108	310 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	SMM1	P53720	384 aa	Known RBP	4.6	□□□□□ -1.67
UBC1	YDR177W	SNU56	Q03782	492 aa	Known RBP	4.6	□□□□□ -1.67
UBC1	YDR177W	POS5	Q06892	414 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	NSE1	Q07913	336 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	GSH2	Q08220	491 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	RDR1	Q08904	546 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	SUT2	Q12286	268 aa		4.6	□□□□□ -1.67
UBC1	YDR177W	SEC3	P33332	1336 aa	Known RBP	4.6	□□□□□ -1.67
UBC1	YDR177W	THO2	P53552	1597 aa	Known RBP	4.6	□□□□□ -1.67
UBC1	YDR177W	STE3	P06783	470 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	ADE5,7	P07244	802 aa	Known RBP	4.59	□□□□□ -1.67
UBC1	YDR177W	GPA1	P08539	472 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	SNF3	P10870	884 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	SCH9	P11792	824 aa	Known RBP	4.59	□□□□□ -1.67
UBC1	YDR177W	ARO3	P14843	370 aa	Known RBP	4.59	□□□□□ -1.67
UBC1	YDR177W	THI80	P35202	319 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	ARN1	P38731	627 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	UBA4	P38820	440 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	MNL1	P38888	796 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	MNN9	P39107	395 aa	Known RBP	4.59	□□□□□ -1.67
UBC1	YDR177W	CDC1	P40986	491 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	SEC27	P41811	889 aa	Known RBP	4.59	□□□□□ -1.67
UBC1	YDR177W	YHC3	P47040	408 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	YJR154W	P47181	346 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	MRK1	P50873	501 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	ROG1	P53118	685 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	RPN14	P53196	417 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	CWC21	Q03375	135 aa	Known RBP	4.59	□□□□□ -1.67
UBC1	YDR177W	GIS1	Q03833	894 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	VPS20	Q04272	221 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	HSP31	Q04432	237 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	SMA2	Q04658	369 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	MSC3	Q05812	728 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	YLR297W	Q05899	129 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	ADE13	Q05911	482 aa	Known RBP	4.59	□□□□□ -1.67
UBC1	YDR177W	IPK1	Q06667	281 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	YLR413W	Q06689	675 aa		4.59	□□□□□ -1.67
UBC1	YDR177W	RDL1	Q12305	139 aa	Known RBP	4.59	□□□□□ -1.67
UBC1	YDR177W	MDS3	P53094	1487 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	TAF2	P23255	1407 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	ADE4	P04046	510 aa	Known RBP	4.58	□□□□□ -1.68
UBC1	YDR177W	GAL4	P04386	881 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	RNR2	P09938	399 aa	Known RBP	4.58	□□□□□ -1.68
UBC1	YDR177W	CNA1	P23287	553 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	SNC1	P31109	117 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	ELM1	P32801	640 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	YUH1	P35127	236 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	SPT10	P35208	640 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	MIC60	P36112	540 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	PXL1	P36166	706 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	ATP3	P38077	311 aa	Known RBP	4.58	□□□□□ -1.68
UBC1	YDR177W	DUG2	P38149	878 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	MSG5	P38590	489 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	SPC97	P38863	823 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	YJR011C	P47086	261 aa	Predicted RBP	4.58	□□□□□ -1.68
UBC1	YDR177W	KIN4	Q01919	800 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	UTP6	Q02354	440 aa	Known RBP	4.58	□□□□□ -1.68
UBC1	YDR177W	ARP10	Q04549	284 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	MCP2	Q06567	569 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	YOR365C	Q08844	703 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	SGT2	Q12118	346 aa	Known RBP	4.58	□□□□□ -1.68
UBC1	YDR177W	RRD2	Q12461	358 aa		4.58	□□□□□ -1.68
UBC1	YDR177W	REV3	P14284	1504 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	SUP35	P05453	685 aa	Known RBP	4.57	□□□□□ -1.68
UBC1	YDR177W	CDC21	P06785	304 aa		4.57	□□□□□ -1.68
UBC1	YDR177W	THR4	P16120	514 aa	Known RBP	4.57	□□□□□ -1.68
UBC1	YDR177W	PRP21	P32524	280 aa	Predicted RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms