RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BRE4	YDL231C	WHI3	P34761	661 aa	Known RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	LHS1	P36016	881 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	YCR087C-A	P37263	153 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	POA1	P38218	177 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	GIM4	P40005	111 aa	Known RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	LEE1	Q02799	301 aa	Known RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	UGO1	Q03327	502 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	SPR28	Q04921	423 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	GPI11	Q06636	219 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	GRS2	Q06817	618 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	ATG34	Q12292	412 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	TMA17	Q12513	150 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	MET17	P06106	444 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	YAR066W	P0CX18	203 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	YHR214W	P0CX19	203 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	MRPS28	P21771	286 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	YCK1	P23291	538 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	TFC1	P32367	649 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	HXT4	P32467	576 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	PET127	P32606	800 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	TCD2	P36101	447 aa	Known RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	ECM4	P36156	370 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	YHR045W	P38775	560 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	HXT6	P39003	570 aa	Known RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	HXT7	P39004	570 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	AIM2	P39721	246 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	RBG1	P39729	369 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	MTR3	P48240	250 aa	Predicted RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	RIM21	P48565	533 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	SWF1	Q04629	336 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	BOP2	Q06150	570 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	TSR2	Q06672	205 aa	Known RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	PUS7	Q08647	676 aa	Known RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	RPN8	Q08723	338 aa	Known RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	YOR342C	Q12182	319 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	PFK27	Q12471	397 aa	Predicted RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	Q0182	Q9ZZW1	134 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	ATR1	P13090	542 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	AAT2	P23542	418 aa	Known RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	TIP20	P33891	701 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	PHO11	P35842	467 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	SET3	P36124	751 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	PHO12	P38693	467 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	HEM14	P40012	539 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	THO1	P40040	218 aa	Known RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	GYP8	P43570	497 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	IRC6	P43615	237 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	SDT1	P53078	280 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	BIO5	P53744	561 aa	Known RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	DSL1	P53847	754 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	NUT2	Q06213	157 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	ARV1	Q06541	321 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	UAF30	Q08747	228 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	YOR114W	Q12219	294 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	YPR064W	Q12492	139 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	RMD5	Q12508	421 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	TMA7	Q3E764	64 aa	Known RBP	4.06	□□□□□ -1.76
BRE4	YDL231C	VCX1	Q99385	411 aa		4.06	□□□□□ -1.76
BRE4	YDL231C	MF(ALPHA)1	P01149	165 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	COR1	P07256	457 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	PET9	P18239	318 aa	Known RBP	4.05	□□□□□ -1.76
BRE4	YDL231C	DBR1	P24309	405 aa	Known RBP	4.05	□□□□□ -1.76
BRE4	YDL231C	GSH1	P32477	678 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
BRE4	YDL231C	DOM34	P33309	386 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	TIF3	P34167	436 aa	Known RBP	4.05	□□□□□ -1.76
BRE4	YDL231C	IST2	P38250	946 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	MGE1	P38523	228 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	YHR127W	P38833	243 aa	Known RBP	4.05	□□□□□ -1.76
BRE4	YDL231C	VNX1	P42839	908 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	ZIM17	P42844	174 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	MNN10	P50108	393 aa	Known RBP	4.05	□□□□□ -1.76
BRE4	YDL231C	BCH1	Q05029	724 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	MHF2	Q3E829	80 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	RAD7	P06779	565 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	APA1	P16550	321 aa	Known RBP	4.05	□□□□□ -1.76
BRE4	YDL231C	PTP2	P29461	750 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	GUT2	P32191	649 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	TIF34	P40217	347 aa	Known RBP	4.05	□□□□□ -1.76
BRE4	YDL231C	RPL10	P41805	221 aa	Known RBP	4.05	□□□□□ -1.76
BRE4	YDL231C	OYE3	P41816	400 aa	Predicted RBP	4.05	□□□□□ -1.76
BRE4	YDL231C	BIO3	P50277	480 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	YGL108C	P53139	140 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	LSC1	P53598	329 aa	Known RBP	4.05	□□□□□ -1.76
BRE4	YDL231C	ATG17	Q06410	417 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
BRE4	YDL231C	PUT2	P07275	575 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	YKR104W	P0CE69	306 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	CMK2	P22517	447 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	IMG2	P25642	146 aa	Predicted RBP	4.05	□□□□□ -1.76
BRE4	YDL231C	RML2	P32611	393 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	YER034W	P40022	185 aa	Known RBP	4.05	□□□□□ -1.76
BRE4	YDL231C	RIC1	P40395	1056 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	PMT4	P46971	762 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	TOM22	P49334	152 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	CCH1	P50077	2039 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	COS12	P53053	380 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	GRX5	Q02784	150 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	GAS3	Q03655	524 aa		4.05	□□□□□ -1.76
BRE4	YDL231C	YPR109W	Q06104	294 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms