RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 FAM186BQ8IYM0 893 aa11.8□□□□□ -0.52
KCNMA1-259ENST00000639406 SLC26A7Q8TE54 656 aa11.8□□□□□ -0.52
KCNMA1-259ENST00000639406 B4E1Z4 1266 aa11.8□□□□□ -0.52
KCNMA1-259ENST00000639406 ECE1P42892 770 aa11.8□□□□□ -0.52
KCNMA1-259ENST00000639406 INAQ16352 499 aa11.8□□□□□ -0.52
KCNMA1-259ENST00000639406 RARS2Q5T160 578 aaKnown RBP11.8□□□□□ -0.52
KCNMA1-259ENST00000639406 HAUS3Q68CZ6 603 aa11.8□□□□□ -0.52
KCNMA1-259ENST00000639406 KIAA0825Q8IV33 1275 aa11.8□□□□□ -0.52
KCNMA1-259ENST00000639406 PHKBQ93100 1093 aa11.8□□□□□ -0.52
KCNMA1-259ENST00000639406 PDP2Q9P2J9 529 aa11.8□□□□□ -0.52
KCNMA1-259ENST00000639406 KCNJ14Q9UNX9 436 aa11.8□□□□□ -0.52
KCNMA1-259ENST00000639406 PARD3Q8TEW0 1356 aa11.8□□□□□ -0.52
KCNMA1-259ENST00000639406 A0A1B0GW55 424 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 B4DLN1 442 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 DUX4L2P0CJ85 424 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 DUX4L3P0CJ86 424 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 DUX4L4P0CJ87 422 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 DUX4L5P0CJ88 424 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 DUX4L6P0CJ89 424 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 DUX4L7P0CJ90 424 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 CRLF3Q8IUI8 442 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 VTI1AQ96AJ9 217 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 ZBTB3Q9H5J0 574 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 NHEJ1Q9H9Q4 299 aaPredicted RBP11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 SMYD2Q9NRG4 433 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 DUX4Q9UBX2 424 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 ANGEL1Q9UNK9 670 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 EHBP1L1Q8N3D4 1523 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 NAIPQ13075 1403 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 EXOC3O60645 756 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 DPY19L2Q6NUT2 758 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 TTLL7Q6ZT98 887 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 RNF34Q969K3 372 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 AP1M1Q9BXS5 423 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 TM6SF1Q9BZW5 370 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 PAPOLBQ9NRJ5 636 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 SEPT3Q9UH03 358 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 V9GY48 417 aaPredicted RBP11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 C9orf84Q5VXU9 1444 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 USP27XA6NNY8 438 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 GRM8O00222 908 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 XRCC5P13010 732 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 DZIP3Q86Y13 1208 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 DCLK2Q8N568 766 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 PROCA1Q8NCQ7 364 aaPredicted RBP11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 DDHD1Q8NEL9 900 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 SIRT1Q96EB6 747 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 HOOK2Q96ED9 719 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 TGS1Q96RS0 853 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 CHPF2Q9P2E5 772 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 MCM8Q9UJA3 840 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 EXOC7Q9UPT5 735 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 TMA7Q9Y2S6 64 aaKnown RBP11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 NBNO60934 754 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 NDUFA10O95299 355 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 TFCP2Q12800 502 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 CATSPER1Q8NEC5 780 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 NT5C3AQ9H0P0 336 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 STMN3Q9NZ72 180 aa11.79□□□□□ -0.52
KCNMA1-259ENST00000639406 GCNT3O95395 438 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 PDXDC1Q6P996 788 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 EP400NLQ6ZTU2 488 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 POMGNT1Q8WZA1 660 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 PDLIM2Q96JY6 352 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 FAM227BQ96M60 508 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 NSFL1CQ9UNZ2 370 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 PCDHA13Q9Y5I0 950 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 EPHB1P54762 984 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 KRT81Q14533 505 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 TRIM16LQ309B1 348 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 BTNL9Q6UXG8 535 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 NSMCE1Q8WV22 266 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 CLMNQ96JQ2 1002 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 PARVBQ9HBI1 364 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 NOD2Q9HC29 1040 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 A0A1W2PQ27 194 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 A0A1W2PQ64 194 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 A0A1W2PQD8 194 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 SGK1O00141 431 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 GSPT1P15170 499 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 MDH1P40925 334 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 SGO2Q562F6 1265 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 DAB2IPQ5VWQ8 1189 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 RAPH1Q70E73 1250 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 FBXL13Q8NEE6 735 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 CLIC4Q9Y696 253 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 TIAM1Q13009 1591 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 DAPK1P53355 1430 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 SRGAP2O75044 1071 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 VAMP4O75379 141 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 ANXA1P04083 346 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 PARP1P09874 1014 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 ARHGDIAP52565 204 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 RNF207Q6ZRF8 634 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 KRT28Q7Z3Y7 464 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 DTX3LQ8TDB6 740 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 EPRSP07814 1512 aaKnown RBP11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 H3BRJ5 948 aa11.78□□□□□ -0.52
KCNMA1-259ENST00000639406 RPN1P04843 607 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms