RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 HOMER3Q9NSC5 361 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 MFAP3P55082 362 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 PTK2Q05397 1052 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 CNOT6LQ96LI5 555 aaKnown RBP17.06■□□□□ 0.32
TNXB-208ENST00000611016 ZSWIM5Q9P217 1185 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 GCFC2P16383 781 aaKnown RBP17.06■□□□□ 0.32
TNXB-208ENST00000611016 VPS41P49754 854 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 BPIFB4P59827 614 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 PKP1Q13835 747 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 UBE2SQ16763 222 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 EXOC8Q8IYI6 725 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 NUF2Q9BZD4 464 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 RNF8O76064 485 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 GAP43P17677 238 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 RNASELQ05823 741 aaKnown RBP17.06■□□□□ 0.32
TNXB-208ENST00000611016 LRRC41Q15345 812 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 CDC37Q16543 378 aaPredicted RBP17.06■□□□□ 0.32
TNXB-208ENST00000611016 ACCSQ96QU6 501 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.06■□□□□ 0.32
TNXB-208ENST00000611016 ZNF341Q9BYN7 854 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 RIPOR2Q9Y4F9 1068 aa17.06■□□□□ 0.32
TNXB-208ENST00000611016 SH2B2O14492 632 aaPredicted RBP17.05■□□□□ 0.32
TNXB-208ENST00000611016 MYL1P05976 194 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 ZSCAN20P17040 1043 aaPredicted RBP17.05■□□□□ 0.32
TNXB-208ENST00000611016 NR2F2P24468 414 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 CUL4BQ13620 913 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 AK8Q96MA6 479 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 NT5C1BQ96P26 610 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 NACC1Q96RE7 527 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 PPP1R16BQ96T49 567 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 DDX41Q9UJV9 622 aaKnown RBP17.05■□□□□ 0.32
TNXB-208ENST00000611016 ZCCHC11Q5TAX3 1644 aaKnown RBP17.05■□□□□ 0.32
TNXB-208ENST00000611016 CDC25BP30305 580 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 SLC39A14Q15043 492 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 MTERF2Q49AM1 385 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 KAZNQ674X7 775 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 ADAT2Q7Z6V5 191 aaKnown RBP17.05■□□□□ 0.32
TNXB-208ENST00000611016 TRIM11Q96F44 468 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 PPP6R2O75170 966 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 FOXP4Q8IVH2 680 aaPredicted RBP17.05■□□□□ 0.32
TNXB-208ENST00000611016 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
TNXB-208ENST00000611016 TSC1Q92574 1164 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 OSBPL3Q9H4L5 887 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 ADGRL3Q9HAR2 1447 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 ZNF131P52739 623 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 CACNB3P54284 484 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 C4orf50Q6ZRC1 276 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 TAB3Q8N5C8 712 aaPredicted RBP17.05■□□□□ 0.32
TNXB-208ENST00000611016 PI4K2BQ8TCG2 481 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 PCIF1Q9H4Z3 704 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 IFT122Q9HBG6 1241 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 SPATA31E1Q6ZUB1 1445 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 GOLGA8CPA6NN73 597 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 CYP27B1O15528 508 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 ANKRD20A3Q5VUR7 823 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 MAP3K4Q9Y6R4 1608 aa17.05■□□□□ 0.32
TNXB-208ENST00000611016 PSMC2P35998 433 aaKnown RBP17.04■□□□□ 0.32
TNXB-208ENST00000611016 FAM160B2Q86V87 743 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 METTL23Q86XA0 190 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 H2AFZP0C0S5 128 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 H2AFVQ71UI9 128 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 KIF3CO14782 793 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 HOXA13P31271 388 aaPredicted RBP17.04■□□□□ 0.32
TNXB-208ENST00000611016 PCK1P35558 622 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 RABEP2Q9H5N1 569 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 COPB1P53618 953 aaKnown RBP17.04■□□□□ 0.32
TNXB-208ENST00000611016 LMNB2Q03252 620 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 A6NJR5 290 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 GUCY2FP51841 1108 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 ZBTB33Q86T24 672 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 PPP4R1Q8TF05 950 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 SNX25Q9H3E2 840 aa17.04■□□□□ 0.32
TNXB-208ENST00000611016 ZNF215Q9UL58 517 aaPredicted RBP17.04■□□□□ 0.32
TNXB-208ENST00000611016 H7C1W4 665 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 CLIC2O15247 247 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 RGS16O15492 202 aaPredicted RBP17.03■□□□□ 0.32
TNXB-208ENST00000611016 ZNF853P0CG23 659 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 SH3RF3Q8TEJ3 882 aaPredicted RBP17.03■□□□□ 0.32
TNXB-208ENST00000611016 GDAP1L1Q96MZ0 367 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 THAP12O43422 761 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 EIF2AK2P19525 551 aaKnown RBP17.03■□□□□ 0.32
TNXB-208ENST00000611016 NR5A1Q13285 461 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 KRT71Q3SY84 523 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 TMED8Q6PL24 325 aaPredicted RBP17.03■□□□□ 0.32
TNXB-208ENST00000611016 TUBGCP2Q9BSJ2 902 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 MMP1P03956 469 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 CRKP46108 304 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.03■□□□□ 0.32
TNXB-208ENST00000611016 EFCAB8A8MWE9 144 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 PTPREP23469 700 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 NARFQ9UHQ1 456 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 CDK12Q9NYV4 1490 aaPredicted RBP17.03■□□□□ 0.32
TNXB-208ENST00000611016 SHROOM2Q13796 1616 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 SASH1O94885 1247 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 PSAPP07602 524 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 RSRC2Q7L4I2 434 aaKnown RBP17.03■□□□□ 0.32
TNXB-208ENST00000611016 MGARPQ8TDB4 240 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 PCDHA5Q9Y5H7 936 aa17.03■□□□□ 0.32
TNXB-208ENST00000611016 SF3A3Q12874 501 aaKnown RBP eCLIP17.02■□□□□ 0.32
TNXB-208ENST00000611016 CAPN12Q6ZSI9 719 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms