RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 RIPOR3Q96MK2 946 aa8.24□□□□□ -1.09
MUC1-221ENST00000610359 MRS2Q9HD23 443 aa8.24□□□□□ -1.09
MUC1-221ENST00000610359 FASNP49327 2511 aaKnown RBP8.24□□□□□ -1.09
MUC1-221ENST00000610359 TTC3P53804 2025 aa8.24□□□□□ -1.09
MUC1-221ENST00000610359 IGKV6D-41A0A0C4DH26 115 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 C5orf67F2Z3F1 127 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 KPNA6O60684 536 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 AMHP03971 560 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 GNAI2P04899 355 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 CHGBP05060 677 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 ALAS1P13196 640 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 RASA1P20936 1047 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 ICAM3P32942 547 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 ALDH5A1P51649 535 aaPredicted RBP8.23□□□□□ -1.09
MUC1-221ENST00000610359 SNAP25P60880 206 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 CAMK1Q14012 370 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 CTR9Q6PD62 1173 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 SMRP1Q8NCR6 262 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 DBF4BQ8NFT6 615 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 TOP1MTQ969P6 601 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 OSBPL7Q9BZF2 842 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 INCENPQ9NQS7 918 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 ATP8A2Q9NTI2 1148 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 CLIP2Q9UDT6 1046 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 KAT6AQ92794 2004 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 FAM208BQ5VWN6 2430 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 ZBED9Q6R2W3 1325 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 LOXHD1Q8IVV2 1947 aa8.23□□□□□ -1.09
MUC1-221ENST00000610359 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.22□□□□□ -1.09
MUC1-221ENST00000610359 TMEM232C9JQI7 657 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 SURF6O75683 361 aaKnown RBP8.22□□□□□ -1.09
MUC1-221ENST00000610359 UPP2O95045 317 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 CSPG5O95196 566 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 MBD4O95243 580 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 ARIH2O95376 493 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 ARP10275 920 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 CTNNB1P35222 781 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 SLFN5Q08AF3 891 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 COASYQ13057 564 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 OS9Q13438 667 aaPredicted RBP8.22□□□□□ -1.09
MUC1-221ENST00000610359 HIC1Q14526 733 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 PTPN21Q16825 1174 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 TKFCQ3LXA3 575 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 NSMFQ6X4W1 530 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 ADGRD2Q7Z7M1 963 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 LRRC47Q8N1G4 583 aaKnown RBP8.22□□□□□ -1.09
MUC1-221ENST00000610359 SSH3Q8TE77 659 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 MKL1Q969V6 931 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 RPGRIP1Q96KN7 1286 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 YME1L1Q96TA2 773 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 PHF7Q9BWX1 381 aaPredicted RBP8.22□□□□□ -1.09
MUC1-221ENST00000610359 LMAN2LQ9H0V9 348 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 HDAC6Q9UBN7 1215 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 GTF2IRD1Q9UHL9 959 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 TNNQ9UQP3 1299 aa8.22□□□□□ -1.09
MUC1-221ENST00000610359 USP15Q9Y4E8 981 aaPredicted RBP8.22□□□□□ -1.09
MUC1-221ENST00000610359 NKRFO15226 690 aaKnown RBP eCLIP8.21□□□□□ -1.1
MUC1-221ENST00000610359 BCAR3O75815 825 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 GLP2RO95838 553 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 FDX1P10109 184 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 BMP3P12645 472 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 DNAJB1P25685 340 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 BMPR1AP36894 532 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 NDUFV1P49821 464 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 ZNF200P98182 395 aaPredicted RBP8.21□□□□□ -1.1
MUC1-221ENST00000610359 PTK7Q13308 1070 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 BAATQ14032 418 aaPredicted RBP8.21□□□□□ -1.1
MUC1-221ENST00000610359 PPP2R5BQ15173 497 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 PLEKHG4Q58EX7 1191 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 BRDTQ58F21 947 aaPredicted RBP8.21□□□□□ -1.1
MUC1-221ENST00000610359 SLFN13Q68D06 897 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 RPAP2Q8IXW5 612 aaPredicted RBP8.21□□□□□ -1.1
MUC1-221ENST00000610359 STK11IPQ8N1F8 1099 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 GMCL1P1Q8NEA9 526 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 CHMP4CQ96CF2 233 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 NOP58Q9Y2X3 529 aaKnown RBP8.21□□□□□ -1.1
MUC1-221ENST00000610359 RAD50Q92878 1312 aa8.21□□□□□ -1.1
MUC1-221ENST00000610359 ANKRD11Q6UB99 2663 aaPredicted RBP8.21□□□□□ -1.1
MUC1-221ENST00000610359 GPR179Q6PRD1 2367 aa8.2□□□□□ -1.1
MUC1-221ENST00000610359 CACNA1IQ9P0X4 2223 aa8.2□□□□□ -1.1
MUC1-221ENST00000610359 MMP1P03956 469 aa8.2□□□□□ -1.1
MUC1-221ENST00000610359 RB1P06400 928 aa8.2□□□□□ -1.1
MUC1-221ENST00000610359 MMP3P08254 477 aa8.2□□□□□ -1.1
MUC1-221ENST00000610359 TXNP10599 105 aaKnown RBP8.2□□□□□ -1.1
MUC1-221ENST00000610359 ATP8B2P98198 1209 aa8.2□□□□□ -1.1
MUC1-221ENST00000610359 TTF1Q15361 905 aaPredicted RBP8.2□□□□□ -1.1
MUC1-221ENST00000610359 MCTP2Q6DN12 878 aa8.2□□□□□ -1.1
MUC1-221ENST00000610359 AFG1LQ8WV93 481 aa8.2□□□□□ -1.1
MUC1-221ENST00000610359 STAG1Q8WVM7 1258 aa8.2□□□□□ -1.1
MUC1-221ENST00000610359 CEP95Q96GE4 821 aa8.2□□□□□ -1.1
MUC1-221ENST00000610359 BARX2Q9UMQ3 279 aaPredicted RBP8.2□□□□□ -1.1
MUC1-221ENST00000610359 PCDHGC5Q9Y5F6 944 aa8.2□□□□□ -1.1
MUC1-221ENST00000610359 MYH6P13533 1939 aa8.19□□□□□ -1.1
MUC1-221ENST00000610359 GOLIM4O00461 696 aa8.19□□□□□ -1.1
MUC1-221ENST00000610359 NFIBO00712 420 aa8.19□□□□□ -1.1
MUC1-221ENST00000610359 EDNRBP24530 442 aa8.19□□□□□ -1.1
MUC1-221ENST00000610359 ADD2P35612 726 aa8.19□□□□□ -1.1
MUC1-221ENST00000610359 STAT2P52630 851 aa8.19□□□□□ -1.1
MUC1-221ENST00000610359 RBM10P98175 930 aaKnown RBP8.19□□□□□ -1.1
MUC1-221ENST00000610359 PUM1Q14671 1186 aaKnown RBP eCLIP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms