RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 TXNP10599 105 aaKnown RBP23.04■■□□□ 1.28
SSBP4-210ENST00000601444 CCND2P30279 289 aa23.04■■□□□ 1.28
SSBP4-210ENST00000601444 ADCY7P51828 1080 aa23.04■■□□□ 1.28
SSBP4-210ENST00000601444 BEX3Q00994 111 aa23.04■■□□□ 1.28
SSBP4-210ENST00000601444 ST3GAL1Q11201 340 aa23.04■■□□□ 1.28
SSBP4-210ENST00000601444 CCSAPQ6IQ19 270 aaPredicted RBP23.04■■□□□ 1.28
SSBP4-210ENST00000601444 CPLX2Q6PUV4 134 aaKnown RBP23.04■■□□□ 1.28
SSBP4-210ENST00000601444 TLK2Q86UE8 772 aa23.04■■□□□ 1.28
SSBP4-210ENST00000601444 TRIM22Q8IYM9 498 aa23.04■■□□□ 1.28
SSBP4-210ENST00000601444 SCFD2Q8WU76 684 aa23.04■■□□□ 1.28
SSBP4-210ENST00000601444 GTF3C6Q969F1 213 aa23.04■■□□□ 1.28
SSBP4-210ENST00000601444 PGBD1Q96JS3 809 aa23.04■■□□□ 1.28
SSBP4-210ENST00000601444 RTEL1Q9NZ71 1219 aa23.04■■□□□ 1.28
SSBP4-210ENST00000601444 KCNA10Q16322 511 aa23.03■■□□□ 1.28
SSBP4-210ENST00000601444 LY6KQ17RY6 165 aa23.03■■□□□ 1.28
SSBP4-210ENST00000601444 CCDC62Q6P9F0 684 aa23.03■■□□□ 1.28
SSBP4-210ENST00000601444 DEXIO95424 95 aa23.02■■□□□ 1.28
SSBP4-210ENST00000601444 CLK2P49760 499 aaKnown RBP23.02■■□□□ 1.28
SSBP4-210ENST00000601444 GNASQ5JWF2 1037 aa23.02■■□□□ 1.28
SSBP4-210ENST00000601444 ZMYND12Q9H0C1 365 aa23.02■■□□□ 1.28
SSBP4-210ENST00000601444 LIMCH1Q9UPQ0 1083 aa23.02■■□□□ 1.28
SSBP4-210ENST00000601444 SPDYE3A6NKU9 549 aa23.01■■□□□ 1.27
SSBP4-210ENST00000601444 ATN1P54259 1190 aaPredicted RBP23.01■■□□□ 1.27
SSBP4-210ENST00000601444 NKX3-2P78367 333 aa23.01■■□□□ 1.27
SSBP4-210ENST00000601444 TTLL4Q14679 1199 aa23.01■■□□□ 1.27
SSBP4-210ENST00000601444 RABEP1Q15276 862 aa23.01■■□□□ 1.27
SSBP4-210ENST00000601444 JAKMIP3Q5VZ66 844 aa23.01■■□□□ 1.27
SSBP4-210ENST00000601444 DPF3Q92784 378 aa23.01■■□□□ 1.27
SSBP4-210ENST00000601444 AP5M1Q9H0R1 490 aa23.01■■□□□ 1.27
SSBP4-210ENST00000601444 SPC25Q9HBM1 224 aa23.01■■□□□ 1.27
SSBP4-210ENST00000601444 DDX41Q9UJV9 622 aaKnown RBP23.01■■□□□ 1.27
SSBP4-210ENST00000601444 PHF24Q9UPV7 400 aa23.01■■□□□ 1.27
SSBP4-210ENST00000601444 Q9Y3F1 56 aa23.01■■□□□ 1.27
SSBP4-210ENST00000601444 ESYT2A0FGR8 921 aa23■■□□□ 1.27
SSBP4-210ENST00000601444 CDKL5O76039 1030 aa23■■□□□ 1.27
SSBP4-210ENST00000601444 CST5P28325 142 aaPredicted RBP23■■□□□ 1.27
SSBP4-210ENST00000601444 ACLYP53396 1101 aa23■■□□□ 1.27
SSBP4-210ENST00000601444 FSCN1Q16658 493 aaKnown RBP23■■□□□ 1.27
SSBP4-210ENST00000601444 LRRC26Q2I0M4 334 aa23■■□□□ 1.27
SSBP4-210ENST00000601444 PCNX4Q63HM2 1172 aa23■■□□□ 1.27
SSBP4-210ENST00000601444 OR6J1Q8NGC5 347 aa23■■□□□ 1.27
SSBP4-210ENST00000601444 HTATIP2Q9BUP3 242 aa23■■□□□ 1.27
SSBP4-210ENST00000601444 C6orf50Q9HD87 102 aa23■■□□□ 1.27
SSBP4-210ENST00000601444 MRVI1Q9Y6F6 885 aa23■■□□□ 1.27
SSBP4-210ENST00000601444 DNAH12Q6ZR08 3092 aa23■■□□□ 1.27
SSBP4-210ENST00000601444 A0A1W2PQ45 241 aaPredicted RBP22.99■■□□□ 1.27
SSBP4-210ENST00000601444 A0A1W2PQY0 241 aa22.99■■□□□ 1.27
SSBP4-210ENST00000601444 JAK2O60674 1132 aa22.99■■□□□ 1.27
SSBP4-210ENST00000601444 ASGR1P07306 291 aa22.99■■□□□ 1.27
SSBP4-210ENST00000601444 FDPSP14324 419 aaKnown RBP22.99■■□□□ 1.27
SSBP4-210ENST00000601444 SP2Q02086 613 aa22.99■■□□□ 1.27
SSBP4-210ENST00000601444 NSUN7Q8NE18 718 aaKnown RBP22.99■■□□□ 1.27
SSBP4-210ENST00000601444 RASGRP4Q8TDF6 673 aa22.99■■□□□ 1.27
SSBP4-210ENST00000601444 CCDC12Q8WUD4 166 aaPredicted RBP22.99■■□□□ 1.27
SSBP4-210ENST00000601444 TSEN34Q9BSV6 310 aaKnown RBP22.99■■□□□ 1.27
SSBP4-210ENST00000601444 ANO3Q9BYT9 981 aa22.99■■□□□ 1.27
SSBP4-210ENST00000601444 GJB4Q9NTQ9 266 aa22.99■■□□□ 1.27
SSBP4-210ENST00000601444 SORBS3O60504 671 aa22.98■■□□□ 1.27
SSBP4-210ENST00000601444 CD2BP2O95400 341 aaKnown RBP22.98■■□□□ 1.27
SSBP4-210ENST00000601444 NLRP5P59047 1200 aa22.98■■□□□ 1.27
SSBP4-210ENST00000601444 CCDC83Q8IWF9 413 aa22.98■■□□□ 1.27
SSBP4-210ENST00000601444 INPP4AQ96PE3 977 aaPredicted RBP22.98■■□□□ 1.27
SSBP4-210ENST00000601444 GLT8D2Q9H1C3 349 aa22.98■■□□□ 1.27
SSBP4-210ENST00000601444 BCAS3Q9H6U6 928 aa22.98■■□□□ 1.27
SSBP4-210ENST00000601444 SH3GLB2Q9NR46 395 aa22.98■■□□□ 1.27
SSBP4-210ENST00000601444 ORC3Q9UBD5 711 aaPredicted RBP22.98■■□□□ 1.27
SSBP4-210ENST00000601444 STK36Q9NRP7 1315 aa22.98■■□□□ 1.27
SSBP4-210ENST00000601444 NKRFO15226 690 aaKnown RBP eCLIP22.97■■□□□ 1.27
SSBP4-210ENST00000601444 ARHGAP1Q07960 439 aa22.97■■□□□ 1.27
SSBP4-210ENST00000601444 SEMA3FQ13275 785 aa22.97■■□□□ 1.27
SSBP4-210ENST00000601444 SLC39A5Q6ZMH5 540 aa22.97■■□□□ 1.27
SSBP4-210ENST00000601444 PCSK9Q8NBP7 692 aaKnown RBP22.97■■□□□ 1.27
SSBP4-210ENST00000601444 CCDC148Q8NFR7 591 aa22.97■■□□□ 1.27
SSBP4-210ENST00000601444 MOXD2PA6NHM9 499 aa22.96■■□□□ 1.27
SSBP4-210ENST00000601444 FOSP01100 380 aaPredicted RBP22.96■■□□□ 1.27
SSBP4-210ENST00000601444 ITGB5P18084 799 aa22.96■■□□□ 1.27
SSBP4-210ENST00000601444 GNA11P29992 359 aa22.96■■□□□ 1.27
SSBP4-210ENST00000601444 AP3B2Q13367 1082 aa22.96■■□□□ 1.27
SSBP4-210ENST00000601444 XRRA1Q6P2D8 792 aa22.96■■□□□ 1.27
SSBP4-210ENST00000601444 CXCL17Q6UXB2 119 aa22.96■■□□□ 1.27
SSBP4-210ENST00000601444 TEX2Q8IWB9 1127 aa22.96■■□□□ 1.27
SSBP4-210ENST00000601444 REXO1Q8N1G1 1221 aaKnown RBP22.96■■□□□ 1.27
SSBP4-210ENST00000601444 PCDH10Q9P2E7 1040 aa22.96■■□□□ 1.27
SSBP4-210ENST00000601444 KCNJ14Q9UNX9 436 aa22.96■■□□□ 1.27
SSBP4-210ENST00000601444 KIAA1217Q5T5P2 1943 aa22.96■■□□□ 1.27
SSBP4-210ENST00000601444 SPATA31C2B4DYI2 1134 aa22.95■■□□□ 1.26
SSBP4-210ENST00000601444 EVI5O60447 810 aa22.95■■□□□ 1.26
SSBP4-210ENST00000601444 STAM2O75886 525 aa22.95■■□□□ 1.26
SSBP4-210ENST00000601444 GH1P01241 217 aa22.95■■□□□ 1.26
SSBP4-210ENST00000601444 NPY5RQ15761 445 aa22.95■■□□□ 1.26
SSBP4-210ENST00000601444 CYP2W1Q8TAV3 490 aa22.95■■□□□ 1.26
SSBP4-210ENST00000601444 AFG1LQ8WV93 481 aa22.95■■□□□ 1.26
SSBP4-210ENST00000601444 ZSCAN31Q96LW9 406 aaPredicted RBP22.95■■□□□ 1.26
SSBP4-210ENST00000601444 UBIAD1Q9Y5Z9 338 aa22.95■■□□□ 1.26
SSBP4-210ENST00000601444 ST18O60284 1047 aa22.94■■□□□ 1.26
SSBP4-210ENST00000601444 UBA1P22314 1058 aaKnown RBP22.94■■□□□ 1.26
SSBP4-210ENST00000601444 ICAM3P32942 547 aa22.94■■□□□ 1.26
SSBP4-210ENST00000601444 SREBF1P36956 1147 aa22.94■■□□□ 1.26
SSBP4-210ENST00000601444 GNPTABQ3T906 1256 aa22.94■■□□□ 1.26
SSBP4-210ENST00000601444 KCNV1Q6PIU1 500 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms