RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 PCF11O94913 1555 aaKnown RBP5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 A0A1W2PQJ5 194 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 OR14I1A6ND48 311 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 FAM153BP0C7A2 387 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 TACR1P25103 407 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 KCNAB2Q13303 367 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 LONRF2Q1L5Z9 754 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 SCUBE1Q8IWY4 988 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 MTA3Q9BTC8 594 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 KCNK12Q9HB15 430 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 TNFRSF12AQ9NP84 129 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 DCP1AQ9NPI6 582 aaPredicted RBP5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 GULP1Q9UBP9 304 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 RWDD3Q9Y3V2 267 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 PLCH2O75038 1416 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 TROQ12816 1431 aaPredicted RBP5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 FANCAO15360 1455 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 ADGRL1O94910 1474 aa5.39□□□□□ -1.55
CKS1BP3-201ENST00000600888 CDC42BPAQ5VT25 1732 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 MPOP05164 745 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 LTBRP36941 435 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 FOXB2Q5VYV0 432 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 BICRALQ6AI39 1079 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 OGFOD2Q6N063 350 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 LILRB2Q8N423 598 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 LZTR1Q8N653 840 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 JMYQ8N9B5 988 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 RCBTB1Q8NDN9 531 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 MRFAP1L1Q96HT8 127 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 CDC6Q99741 560 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 EPB41L4BQ9H329 900 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 KLHL14Q9P2G3 628 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 TIMM13Q9Y5L4 95 aaPredicted RBP5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 NPFFR2Q9Y5X5 522 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 CLIP1P30622 1438 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 AKNAQ7Z591 1439 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 DENND4BO75064 1496 aaPredicted RBP5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 MAGI2Q86UL8 1455 aa5.38□□□□□ -1.55
CKS1BP3-201ENST00000600888 PREX2Q70Z35 1606 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 ADAMTSL3P82987 1691 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 TRBV23-1A0A0A0MS06 115 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 FARP2O94887 1054 aaPredicted RBP5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 FUCA1P04066 466 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 LCP1P13796 627 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 YBX1P67809 324 aaKnown RBP5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 MESP2Q0VG99 397 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 CBX2Q14781 532 aaPredicted RBP5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 RAB3GAP1Q15042 981 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 NTRK3Q16288 839 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 ZC3H12BQ5HYM0 836 aaKnown RBP5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 FAM209AQ5JX71 171 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 USP53Q70EK8 1073 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 ZNF605Q86T29 641 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 FBXO15Q8NCQ5 510 aaPredicted RBP5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 PLEKHO2Q8TD55 490 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 USP33Q8TEY7 942 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 IPO9Q96P70 1041 aaKnown RBP5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 PIF1Q9H611 641 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 FBLN5Q9UBX5 448 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 PCDHA2Q9Y5H9 948 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 ARHGEF40Q8TER5 1519 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 BCORL1Q5H9F3 1711 aa5.37□□□□□ -1.55
CKS1BP3-201ENST00000600888 BLACEA4D250 179 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 NUDT19A8MXV4 375 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 HRKO00198 91 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 SRGAP3O43295 1099 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 MYO1BO43795 1136 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 PEX10O60683 326 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 CYBBP04839 570 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 DBHP09172 617 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 GLI4P10075 376 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 BCL6P41182 706 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 TXKP42681 527 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 GTF2A2P52657 109 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 RPL11P62913 178 aaKnown RBP5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 RBM10P98175 930 aaKnown RBP5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 NR1I3Q14994 352 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 PAQR3Q6TCH7 311 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 RSPO2Q6UXX9 243 aaPredicted RBP5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 POU5F2Q8N7G0 328 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 THAP3Q8WTV1 239 aaPredicted RBP5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 DCAF4Q8WV16 495 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 FAM84AQ96KN4 292 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 EXOC2Q96KP1 924 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 DHRS4Q9BTZ2 278 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 GPR27Q9NS67 375 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 BTG4Q9NY30 223 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 MARCH2Q9P0N8 246 aa5.36□□□□□ -1.55
CKS1BP3-201ENST00000600888 ITSN2Q9NZM3 1697 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 KDM5CP41229 1560 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 MYOCOSA0A1B0GUC4 107 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 ABLIM1O14639 778 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 RAPGEF3O95398 923 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 SUMO1P63165 101 aaKnown RBP5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 TMEM62Q0P6H9 643 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 LSAMPQ13449 338 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 C2orf27AQ580R0 203 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 EFCAB2Q5VUJ9 269 aa5.35□□□□□ -1.55
CKS1BP3-201ENST00000600888 RPTNQ6XPR3 784 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms