RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 ZSCAN22P10073 491 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 MTMR1Q13613 665 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 MAP1SQ66K74 1059 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 BEST2Q8NFU1 509 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 ZKSCAN3Q9BRR0 538 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 MAK16Q9BXY0 300 aaKnown RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 TRPV6Q9H1D0 765 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 ZNF302Q9NR11 478 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 DBNLQ9UJU6 430 aaKnown RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 FARP1Q9Y4F1 1045 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 LRRIQ4A6NIV6 560 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 H7C4K7 107 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 DDX39AO00148 427 aaKnown RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 TBC1D12O60347 775 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 EVI5O60447 810 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 EXOC3O60645 756 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 FGAP02671 866 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 EEF2P13639 858 aaKnown RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 NNMTP40261 264 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 USP11P51784 963 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 NR1H3Q13133 447 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 PLD1Q13393 1074 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 SNX17Q15036 470 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 AAK1Q2M2I8 961 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 CC2D1AQ6P1N0 951 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 NEK11Q8NG66 645 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 SEPT1Q8WYJ6 367 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 CEP170P1Q96L14 293 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 MTG1Q9BT17 334 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 MRPL9Q9BYD2 267 aaKnown RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 KANSL3Q9P2N6 904 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 TMX2Q9Y320 296 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 FRMPD2Q68DX3 1309 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 MEGF6O75095 1541 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 A0A1B0GVL5 298 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 INO80B-WBP1J3KQ70 363 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 IGKV5-2P06315 115 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 RAB27AP51159 221 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 UBE2HP62256 183 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 MXD4Q14582 209 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 SAMD7Q7Z3H4 446 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 ZNF560Q96MR9 790 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 NUP58Q9BVL2 599 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 RNF208Q9H0X6 261 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 MRPL44Q9H9J2 332 aaKnown RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 SLC45A1Q9Y2W3 748 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 PDHXO00330 501 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 MAP3K7O43318 606 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 MED7O43513 233 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 PAFAH1B1P43034 410 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 IGBP1P78318 339 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 ARHGAP29Q52LW3 1261 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 CCDC91Q7Z6B0 441 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 FAM178BQ8IXR5 827 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 SPICE1Q8N0Z3 855 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 STRBPQ96SI9 672 aaKnown RBP6.94□□□□□ -1.3
SMAD4-212ENST00000591126 COLEC11Q9BWP8 271 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 DCP1AQ9NPI6 582 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-212ENST00000591126 AGTPBP1Q9UPW5 1226 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 PCDHB12Q9Y5F1 795 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 HBP1O60381 514 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 TRPA1O75762 1119 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 TGFB3P10600 412 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 XPAP23025 273 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-212ENST00000591126 ADORA1P30542 326 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 MTA1Q13330 715 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 HERC4Q5GLZ8 1057 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-212ENST00000591126 CCAR2Q8N163 923 aaKnown RBP6.94□□□□□ -1.3
SMAD4-212ENST00000591126 GSDMBQ8TAX9 411 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 JAKMIP2Q96AA8 810 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 KIAA1683Q9H0B3 1180 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 FOXP1Q9H334 677 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-212ENST00000591126 RPF1Q9H9Y2 349 aaKnown RBP6.94□□□□□ -1.3
SMAD4-212ENST00000591126 N4BP3O15049 544 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 PRR29P0C7W0 189 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 MYL7Q01449 175 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 GUCY1B3Q02153 619 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 GNASQ5JWF2 1037 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 IQSEC1Q6DN90 963 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 GLB1LQ6UWU2 654 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 CNPY4Q8N129 248 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 MAIP1Q8WWC4 291 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 SNX21Q969T3 373 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 NSUN4Q96CB9 384 aaKnown RBP6.94□□□□□ -1.3
SMAD4-212ENST00000591126 FAM163AQ96GL9 167 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-212ENST00000591126 SELENOOQ9BVL4 669 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 IDI2Q9BXS1 227 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 CREBZFQ9NS37 354 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 PCDHB7Q9Y5E2 793 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 FMN2Q9NZ56 1722 aa6.94□□□□□ -1.3
SMAD4-212ENST00000591126 C17orf102A2RUQ5 167 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 IPO5O00410 1097 aaKnown RBP6.93□□□□□ -1.3
SMAD4-212ENST00000591126 TUBB4AP04350 444 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 PSMC4P43686 418 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 FOXO4P98177 505 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 PPIGQ13427 754 aaKnown RBP eCLIP6.93□□□□□ -1.38e-6■■■■□ 22.7
SMAD4-212ENST00000591126 MAPK6Q16659 721 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 ZNF827Q17R98 1081 aa6.93□□□□□ -1.3
SMAD4-212ENST00000591126 ZNF484Q5JVG2 852 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms