RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 FAM184BQ9ULE4 1060 aa22.34■■□□□ 1.17
CIRBP-220ENST00000588917 MSCO60682 206 aa22.33■■□□□ 1.17
CIRBP-220ENST00000588917 CYBAP13498 195 aa22.33■■□□□ 1.17
CIRBP-220ENST00000588917 CAPN2P17655 700 aa22.33■■□□□ 1.17
CIRBP-220ENST00000588917 CNGA1P29973 690 aa22.33■■□□□ 1.17
CIRBP-220ENST00000588917 USP11P51784 963 aa22.33■■□□□ 1.17
CIRBP-220ENST00000588917 GNL2Q13823 731 aaKnown RBP22.33■■□□□ 1.17
CIRBP-220ENST00000588917 NONOQ15233 471 aaKnown RBP eCLIP22.33■■□□□ 1.17
CIRBP-220ENST00000588917 NPY5RQ15761 445 aa22.33■■□□□ 1.17
CIRBP-220ENST00000588917 GNPTABQ3T906 1256 aa22.33■■□□□ 1.17
CIRBP-220ENST00000588917 DIS3L2Q8IYB7 885 aaKnown RBP22.33■■□□□ 1.17
CIRBP-220ENST00000588917 FOXP1Q9H334 677 aaPredicted RBP22.33■■□□□ 1.17
CIRBP-220ENST00000588917 MAFGO15525 162 aa22.32■■□□□ 1.16
CIRBP-220ENST00000588917 CYP3A4P08684 503 aa22.32■■□□□ 1.16
CIRBP-220ENST00000588917 ZNF865P0CJ78 1059 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-220ENST00000588917 ANP32AP39687 249 aaKnown RBP22.32■■□□□ 1.16
CIRBP-220ENST00000588917 GUCY1B3Q02153 619 aa22.32■■□□□ 1.16
CIRBP-220ENST00000588917 TRIM32Q13049 653 aa22.32■■□□□ 1.16
CIRBP-220ENST00000588917 PRAMEF19Q5SWL8 479 aa22.32■■□□□ 1.16
CIRBP-220ENST00000588917 NLRX1Q86UT6 975 aa22.32■■□□□ 1.16
CIRBP-220ENST00000588917 ZHX1Q9UKY1 873 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-220ENST00000588917 PLXNA1Q9UIW2 1896 aa22.32■■□□□ 1.16
CIRBP-220ENST00000588917 BTBD18B2RXH4 712 aa22.31■■□□□ 1.16
CIRBP-220ENST00000588917 SEPT4O43236 478 aa22.31■■□□□ 1.16
CIRBP-220ENST00000588917 TGFB3P10600 412 aa22.31■■□□□ 1.16
CIRBP-220ENST00000588917 AKR1A1P14550 325 aa22.31■■□□□ 1.16
CIRBP-220ENST00000588917 ZNF76P36508 570 aa22.31■■□□□ 1.16
CIRBP-220ENST00000588917 FOSBP53539 338 aa22.31■■□□□ 1.16
CIRBP-220ENST00000588917 ARHGAP4P98171 946 aa22.31■■□□□ 1.16
CIRBP-220ENST00000588917 EEPD1Q7L9B9 569 aa22.31■■□□□ 1.16
CIRBP-220ENST00000588917 RASGRP4Q8TDF6 673 aa22.31■■□□□ 1.16
CIRBP-220ENST00000588917 SCFD2Q8WU76 684 aa22.31■■□□□ 1.16
CIRBP-220ENST00000588917 CDHR1Q96JP9 859 aa22.31■■□□□ 1.16
CIRBP-220ENST00000588917 NAP1L4Q99733 375 aaKnown RBP22.31■■□□□ 1.16
CIRBP-220ENST00000588917 KATNBL1Q9H079 304 aa22.31■■□□□ 1.16
CIRBP-220ENST00000588917 RBM47A0AV96 593 aaKnown RBP22.3■■□□□ 1.16
CIRBP-220ENST00000588917 GJB1P08034 283 aa22.3■■□□□ 1.16
CIRBP-220ENST00000588917 CCL5P13501 91 aa22.3■■□□□ 1.16
CIRBP-220ENST00000588917 CCDC144BQ3MJ40 725 aa22.3■■□□□ 1.16
CIRBP-220ENST00000588917 TAPT1Q6NXT6 567 aa22.3■■□□□ 1.16
CIRBP-220ENST00000588917 TBCKQ8TEA7 893 aa22.3■■□□□ 1.16
CIRBP-220ENST00000588917 PGBD1Q96JS3 809 aa22.3■■□□□ 1.16
CIRBP-220ENST00000588917 RNF208Q9H0X6 261 aa22.3■■□□□ 1.16
CIRBP-220ENST00000588917 FOXD4L1Q9NU39 408 aa22.3■■□□□ 1.16
CIRBP-220ENST00000588917 DAXXQ9UER7 740 aaPredicted RBP22.3■■□□□ 1.16
CIRBP-220ENST00000588917 ADAMTS3O15072 1205 aa22.29■■□□□ 1.16
CIRBP-220ENST00000588917 MRPS9P82933 396 aaKnown RBP22.29■■□□□ 1.16
CIRBP-220ENST00000588917 TTLL4Q14679 1199 aa22.29■■□□□ 1.16
CIRBP-220ENST00000588917 FBXO16Q8IX29 292 aaPredicted RBP22.29■■□□□ 1.16
CIRBP-220ENST00000588917 OXER1Q8TDS5 423 aa22.29■■□□□ 1.16
CIRBP-220ENST00000588917 CRYGNQ8WXF5 182 aa22.29■■□□□ 1.16
CIRBP-220ENST00000588917 INPP4AQ96PE3 977 aaPredicted RBP22.29■■□□□ 1.16
CIRBP-220ENST00000588917 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.29■■□□□ 1.162e-30■□□□□ 10.2
CIRBP-220ENST00000588917 RTEL1Q9NZ71 1219 aa22.29■■□□□ 1.16
CIRBP-220ENST00000588917 H0YGN5 161 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 NKRFO15226 690 aaKnown RBP eCLIP22.28■■□□□ 1.16
CIRBP-220ENST00000588917 CCND3P30281 292 aaPredicted RBP22.28■■□□□ 1.16
CIRBP-220ENST00000588917 GJA8P48165 433 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 TNFAIP2Q03169 654 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 NR5A1Q13285 461 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 CEP55Q53EZ4 464 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 SEPT14Q6ZU15 432 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 PIK3AP1Q6ZUJ8 805 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 NIPA1Q7RTP0 329 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 TRPV1Q8NER1 839 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 IL31RAQ8NI17 732 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 GPRASP2Q96D09 838 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 MXRA8Q9BRK3 442 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 WDR11Q9BZH6 1224 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 UNC93B1Q9H1C4 597 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 JADE2Q9NQC1 790 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 PAK6Q9NQU5 681 aaPredicted RBP22.28■■□□□ 1.16
CIRBP-220ENST00000588917 Q9Y3F1 56 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 UBIAD1Q9Y5Z9 338 aa22.28■■□□□ 1.16
CIRBP-220ENST00000588917 FIBPO43427 364 aa22.27■■□□□ 1.16
CIRBP-220ENST00000588917 SYT1P21579 422 aa22.27■■□□□ 1.16
CIRBP-220ENST00000588917 U2AF2P26368 475 aaKnown RBP eCLIP22.27■■□□□ 1.162e-10■□□□□ 10.9
CIRBP-220ENST00000588917 ICAM3P32942 547 aa22.27■■□□□ 1.16
CIRBP-220ENST00000588917 CIITAP33076 1130 aa22.27■■□□□ 1.16
CIRBP-220ENST00000588917 MCTP1Q6DN14 999 aa22.27■■□□□ 1.16
CIRBP-220ENST00000588917 NOSTRINQ8IVI9 506 aa22.27■■□□□ 1.16
CIRBP-220ENST00000588917 TNFRSF25Q93038 417 aa22.27■■□□□ 1.16
CIRBP-220ENST00000588917 DDX20Q9UHI6 824 aaKnown RBP22.27■■□□□ 1.16
CIRBP-220ENST00000588917 COLQQ9Y215 455 aaPredicted RBP22.27■■□□□ 1.16
CIRBP-220ENST00000588917 MRVI1Q9Y6F6 885 aa22.27■■□□□ 1.16
CIRBP-220ENST00000588917 DUSP11O75319 330 aaKnown RBP22.26■■□□□ 1.15
CIRBP-220ENST00000588917 TXNP10599 105 aaKnown RBP22.26■■□□□ 1.15
CIRBP-220ENST00000588917 RARBP10826 455 aa22.26■■□□□ 1.15
CIRBP-220ENST00000588917 DUSP28Q4G0W2 176 aa22.26■■□□□ 1.15
CIRBP-220ENST00000588917 MOXD1Q6UVY6 613 aa22.26■■□□□ 1.15
CIRBP-220ENST00000588917 NEK8Q86SG6 692 aa22.26■■□□□ 1.15
CIRBP-220ENST00000588917 GIMAP8Q8ND71 665 aaPredicted RBP22.26■■□□□ 1.15
CIRBP-220ENST00000588917 SPC25Q9HBM1 224 aa22.26■■□□□ 1.15
CIRBP-220ENST00000588917 PDGFCQ9NRA1 345 aa22.26■■□□□ 1.15
CIRBP-220ENST00000588917 DDX49Q9Y6V7 483 aaKnown RBP22.26■■□□□ 1.15
CIRBP-220ENST00000588917 CEP290O15078 2479 aa22.26■■□□□ 1.15
CIRBP-220ENST00000588917 CYP3A7-CYP3A51PA0A087WV96 503 aa22.25■■□□□ 1.15
CIRBP-220ENST00000588917 SPATA31C2B4DYI2 1134 aa22.25■■□□□ 1.15
CIRBP-220ENST00000588917 MEIS1O00470 390 aa22.25■■□□□ 1.15
CIRBP-220ENST00000588917 GCFC2P16383 781 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms