RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 PGM5Q15124 567 aa11.43□□□□□ -0.58
SKA2-208ENST00000583927 CXCL17Q6UXB2 119 aa11.43□□□□□ -0.58
SKA2-208ENST00000583927 SH3RF1Q7Z6J0 888 aa11.43□□□□□ -0.58
SKA2-208ENST00000583927 OR6J1Q8NGC5 347 aa11.43□□□□□ -0.58
SKA2-208ENST00000583927 LRRC2Q9BYS8 371 aa11.43□□□□□ -0.58
SKA2-208ENST00000583927 TMEM39AQ9NV64 488 aa11.43□□□□□ -0.58
SKA2-208ENST00000583927 DDX41Q9UJV9 622 aaKnown RBP11.43□□□□□ -0.58
SKA2-208ENST00000583927 SNX14Q9Y5W7 946 aa11.43□□□□□ -0.58
SKA2-208ENST00000583927 hCG_1984214I3L0E3 225 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 MEIS2O14770 477 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 ZBTB43O43298 467 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 ARIH2O95376 493 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 TIMP1P01033 207 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 GH1P01241 217 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 RAG1P15918 1043 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 EIF2AK2P19525 551 aaKnown RBP11.42□□□□□ -0.58
SKA2-208ENST00000583927 PSMA5P28066 241 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 CCND2P30279 289 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 PTPN11Q06124 597 aaPredicted RBP11.42□□□□□ -0.58
SKA2-208ENST00000583927 ARHGAP1Q07960 439 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 FUT2Q10981 343 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 ITGA7Q13683 1181 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 XRRA1Q6P2D8 792 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 MICU3Q86XE3 530 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 ZNF713Q8N859 430 aaPredicted RBP11.42□□□□□ -0.58
SKA2-208ENST00000583927 VTI1AQ96AJ9 217 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 MTG1Q9BT17 334 aaPredicted RBP11.42□□□□□ -0.58
SKA2-208ENST00000583927 PRDM5Q9NQX1 630 aaPredicted RBP11.42□□□□□ -0.58
SKA2-208ENST00000583927 SCN5AQ14524 2016 aa11.42□□□□□ -0.58
SKA2-208ENST00000583927 MYO9BQ13459 2157 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 CNTNAP5Q8WYK1 1306 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 CCDC196A0A1B0GTZ2 297 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 RGS20O76081 388 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 HOXD8P13378 290 aaPredicted RBP11.41□□□□□ -0.58
SKA2-208ENST00000583927 PTGS1P23219 599 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 ITGB8P26012 769 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 HOXA13P31271 388 aaPredicted RBP11.41□□□□□ -0.58
SKA2-208ENST00000583927 ICAM3P32942 547 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 EVCP57679 992 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 LAMC2Q13753 1193 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 RTN1Q16799 776 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 MFSD5Q6N075 450 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 NFRKBQ6P4R8 1299 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 BLOC1S2Q6QNY1 142 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 SEPT14Q6ZU15 432 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 BADQ92934 168 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 INPP4AQ96PE3 977 aaPredicted RBP11.41□□□□□ -0.58
SKA2-208ENST00000583927 USP26Q9BXU7 913 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 TM6SF1Q9BZW5 370 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 BRPF3Q9ULD4 1205 aa11.41□□□□□ -0.58
SKA2-208ENST00000583927 MYH9P35579 1960 aaKnown RBP11.41□□□□□ -0.58
SKA2-208ENST00000583927 GBF1Q92538 1859 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 SUPT20HL2P0C7V6 817 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 RXRAP19793 462 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 RPS6KB1P23443 525 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 LY6KQ17RY6 165 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 MYSM1Q5VVJ2 828 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 PCNX4Q63HM2 1172 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 PPP1R18Q6NYC8 613 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 SESTD1Q86VW0 696 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 TET1Q8NFU7 2136 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 IL31RAQ8NI17 732 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 PPTC7Q8NI37 304 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 COPS5Q92905 334 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 CUL5Q93034 780 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 JAKMIP1Q96N16 626 aaKnown RBP11.4□□□□□ -0.58
SKA2-208ENST00000583927 ALDH8A1Q9H2A2 487 aaPredicted RBP11.4□□□□□ -0.58
SKA2-208ENST00000583927 PSTPIP2Q9H939 334 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 FAM217BQ9NTX9 383 aaPredicted RBP11.4□□□□□ -0.58
SKA2-208ENST00000583927 PCDH10Q9P2E7 1040 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 MRVI1Q9Y6F6 885 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 CHD9Q3L8U1 2897 aa11.4□□□□□ -0.58
SKA2-208ENST00000583927 KLF18A0A0U1RQI7 1052 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 EIF5BO60841 1220 aaKnown RBP11.39□□□□□ -0.59
SKA2-208ENST00000583927 PPFIA4O75335 1185 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 MMP3P08254 477 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 MYCLP12524 364 aaPredicted RBP11.39□□□□□ -0.59
SKA2-208ENST00000583927 CASTP20810 708 aaKnown RBP11.39□□□□□ -0.59
SKA2-208ENST00000583927 MRPS9P82933 396 aaKnown RBP11.39□□□□□ -0.59
SKA2-208ENST00000583927 FPGSQ05932 587 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 DGKDQ16760 1214 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 GNPTABQ3T906 1256 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 CELF3Q5SZQ8 465 aaKnown RBP11.39□□□□□ -0.59
SKA2-208ENST00000583927 FCHSD1Q86WN1 690 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 CMTR1Q8N1G2 835 aaKnown RBP11.39□□□□□ -0.59
SKA2-208ENST00000583927 SMARCC2Q8TAQ2 1214 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 AFG1LQ8WV93 481 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 TCEANC2Q96MN5 208 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 SENP7Q9BQF6 1050 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 GLT8D2Q9H1C3 349 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 ZSWIM6Q9HCJ5 1215 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 TRANK1O15050 2925 aa11.39□□□□□ -0.59
SKA2-208ENST00000583927 EYSQ5T1H1 3165 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 GOLGA8AA7E2F4 631 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 GOLGA8BA8MQT2 603 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 SPATA31C2B4DYI2 1134 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 SOX1O00570 391 aaPredicted RBP11.38□□□□□ -0.59
SKA2-208ENST00000583927 B4GALT4O60513 344 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 MYL3P08590 195 aa11.38□□□□□ -0.59
SKA2-208ENST00000583927 CDC27P30260 824 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms