RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 MTMR6Q9Y217 621 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 ZNF536O15090 1300 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 CCL15-CCL14A0A0B4J2E2 113 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 BTBD19C9JJ37 291 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 H3BQV1 296 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 STXBP3O00186 592 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 MMP1P03956 469 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 ICAM1P05362 532 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 GNA11P29992 359 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 TM4SF4P48230 202 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 CCL15Q16663 113 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 DEFB115Q30KQ5 88 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 IFFO2Q5TF58 517 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 KRT40Q6A162 431 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 WWC2Q6AWC2 1192 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 PTCRAQ6ISU1 281 aaPredicted RBP9.2□□□□□ -0.94
COPS3-215ENST00000578317 SAMD3Q8N6K7 520 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 CCDC148Q8NFR7 591 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 FAM174AQ8TBP5 190 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 SHISA4Q96DD7 197 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 AIFM3Q96NN9 605 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 PTPN18Q99952 460 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 ZSCAN16Q9H4T2 348 aaPredicted RBP9.2□□□□□ -0.94
COPS3-215ENST00000578317 ZMIZ1Q9ULJ6 1067 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 NOVA2Q9UNW9 492 aaKnown RBP9.2□□□□□ -0.94
COPS3-215ENST00000578317 ZDHHC9Q9Y397 364 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 PCDHA1Q9Y5I3 950 aa9.2□□□□□ -0.94
COPS3-215ENST00000578317 DOCK1Q14185 1865 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 TRPM7Q96QT4 1865 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 PDHXO00330 501 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 ZSCAN22P10073 491 aaPredicted RBP9.19□□□□□ -0.94
COPS3-215ENST00000578317 U2AF2P26368 475 aaKnown RBP eCLIP9.19□□□□□ -0.94
COPS3-215ENST00000578317 MRPL12P52815 198 aaKnown RBP9.19□□□□□ -0.94
COPS3-215ENST00000578317 HERVK_113P62684 666 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 IRX3P78415 501 aaPredicted RBP9.19□□□□□ -0.94
COPS3-215ENST00000578317 KCNH2Q12809 1159 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 NOGQ13253 232 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 SAFBQ15424 915 aaKnown RBP eCLIP9.19□□□□□ -0.94
COPS3-215ENST00000578317 NPY5RQ15761 445 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 TMEM164Q5U3C3 297 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 HEATR3Q7Z4Q2 680 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 DAGLBQ8NCG7 672 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 PIBF1Q8WXW3 757 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 ATG4CQ96DT6 458 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 FOXP1Q9H334 677 aaPredicted RBP9.19□□□□□ -0.94
COPS3-215ENST00000578317 GJB4Q9NTQ9 266 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 VPS54Q9P1Q0 977 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 ZNF214Q9UL59 606 aaPredicted RBP9.19□□□□□ -0.94
COPS3-215ENST00000578317 FCF1Q9Y324 198 aaKnown RBP9.19□□□□□ -0.94
COPS3-215ENST00000578317 RABGAP1Q9Y3P9 1069 aa9.19□□□□□ -0.94
COPS3-215ENST00000578317 SMCO2A6NFE2 343 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 M0R2N6 131 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 GCLCP48506 637 aaPredicted RBP9.18□□□□□ -0.94
COPS3-215ENST00000578317 NAPAP54920 295 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 NLRP5P59047 1200 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 C1QTNF8P60827 252 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 GHRHRQ02643 423 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 SREBF2Q12772 1141 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 PKP1Q13835 747 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 TMEM132BQ14DG7 1078 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 TKFCQ3LXA3 575 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 MCTP2Q6DN12 878 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 OTUD7BQ6GQQ9 843 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 SND1Q7KZF4 910 aaKnown RBP eCLIP9.18□□□□□ -0.94
COPS3-215ENST00000578317 BICD2Q8TD16 824 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 STK32AQ8WU08 396 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 COA7Q96BR5 231 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 TEX13BQ9BXU2 312 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 C6orf50Q9HD87 102 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 RIC8AQ9NPQ8 531 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 MAP3K20Q9NYL2 800 aaKnown RBP9.18□□□□□ -0.94
COPS3-215ENST00000578317 PCDHA4Q9UN74 947 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 MRPL11Q9Y3B7 192 aaKnown RBP9.18□□□□□ -0.94
COPS3-215ENST00000578317 MYH8P13535 1937 aa9.18□□□□□ -0.94
COPS3-215ENST00000578317 ABCB11O95342 1321 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 OTOFQ9HC10 1997 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 RNF223E7ERA6 249 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 MAP2K2P36507 400 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 STAT3P40763 770 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 HTRA3P83110 453 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 KIF23Q02241 960 aaPredicted RBP9.17□□□□□ -0.94
COPS3-215ENST00000578317 BRAPQ7Z569 592 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 DIS3L2Q8IYB7 885 aaKnown RBP9.17□□□□□ -0.94
COPS3-215ENST00000578317 BLIDQ8IZY5 108 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 DEPDC4Q8N2C3 294 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 FAM43AQ8N2R8 423 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 PSTPIP2Q9H939 334 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 BRMS1Q9HCU9 246 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 RBPJLQ9UBG7 517 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 KCNJ14Q9UNX9 436 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 GNEQ9Y223 722 aaKnown RBP9.17□□□□□ -0.94
COPS3-215ENST00000578317 CTDP1Q9Y5B0 961 aaPredicted RBP9.17□□□□□ -0.94
COPS3-215ENST00000578317 PCDHB9Q9Y5E1 797 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 ATP6V1DQ9Y5K8 247 aa9.17□□□□□ -0.94
COPS3-215ENST00000578317 VPS37CA5D8V6 355 aaPredicted RBP9.16□□□□□ -0.94
COPS3-215ENST00000578317 BTBD18B2RXH4 712 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 LZTS3O60299 673 aaPredicted RBP9.16□□□□□ -0.94
COPS3-215ENST00000578317 SLC25A27O95847 323 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 F13A1P00488 732 aa9.16□□□□□ -0.94
COPS3-215ENST00000578317 COPB2P35606 906 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms