RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 NSUN6Q8TEA1 469 aaKnown RBP12.55□□□□□ -0.4
CALCOCO2-228ENST00000576582 AFG1LQ8WV93 481 aa12.55□□□□□ -0.4
CALCOCO2-228ENST00000576582 CTAGE1Q96RT6 745 aa12.55□□□□□ -0.4
CALCOCO2-228ENST00000576582 IWS1Q96ST2 819 aa12.55□□□□□ -0.4
CALCOCO2-228ENST00000576582 SUGCTQ9HAC7 445 aa12.55□□□□□ -0.4
CALCOCO2-228ENST00000576582 C11orf16Q9NQ32 467 aa12.55□□□□□ -0.4
CALCOCO2-228ENST00000576582 TOMM22Q9NS69 142 aa12.55□□□□□ -0.4
CALCOCO2-228ENST00000576582 ZMYM6O95789 1325 aa12.55□□□□□ -0.4
CALCOCO2-228ENST00000576582 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
CALCOCO2-228ENST00000576582 TET1Q8NFU7 2136 aa12.55□□□□□ -0.4
CALCOCO2-228ENST00000576582 LCHNA4D1U4 455 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 PRR33A8MZF0 331 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 ARIH2O95376 493 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 MMP3P08254 477 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 SNHG28P0DPA3 235 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 PCP11498 1178 aaKnown RBP12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 CKBP12277 381 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 ALADP13716 330 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 PDE4AP27815 886 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 GSE1Q14687 1217 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 STXBP2Q15833 593 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 DGKDQ16760 1214 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 PUS10Q3MIT2 529 aaKnown RBP12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 GPATCH4Q5T3I0 446 aaKnown RBP12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 VPS53Q5VIR6 699 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 GJD3Q8N144 294 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 C7orf31Q8N865 590 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 GDPD5Q8WTR4 605 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 PPP1R13LQ8WUF5 828 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 KAT2BQ92831 832 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 KHSRPQ92945 711 aaKnown RBP eCLIP12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 KATNAL1Q9BW62 490 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 UBE2ZQ9H832 354 aaPredicted RBP12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 HELLSQ9NRZ9 838 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 GTF2IRD1Q9UHL9 959 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 CTNNA3Q9UI47 895 aa12.54□□□□□ -0.4
CALCOCO2-228ENST00000576582 LINC01553A4QN01 128 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 NBNO60934 754 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 FGAP02671 866 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 DEFB103AP81534 67 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 ARHGAP1Q07960 439 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 PTK7Q13308 1070 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 LY6KQ17RY6 165 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 RRP12Q5JTH9 1297 aaKnown RBP12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 SPRED2Q7Z698 418 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 MCF2L2Q86YR7 1114 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 FAM178BQ8IXR5 827 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 DHX38Q92620 1227 aaKnown RBP12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 EMID1Q96A84 441 aaPredicted RBP12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 EVI5LQ96CN4 794 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 CRBNQ96SW2 442 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 CD320Q9NPF0 282 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 INSL6Q9Y581 213 aa12.53□□□□□ -0.4
CALCOCO2-228ENST00000576582 TRIP12Q14669 1992 aaPredicted RBP12.52□□□□□ -0.4
CALCOCO2-228ENST00000576582 EIF3JO75822 258 aaKnown RBP12.52□□□□□ -0.41
CALCOCO2-228ENST00000576582 NT5C2P49902 561 aa12.52□□□□□ -0.41
CALCOCO2-228ENST00000576582 LAMC2Q13753 1193 aa12.52□□□□□ -0.41
CALCOCO2-228ENST00000576582 SEPT14Q6ZU15 432 aa12.52□□□□□ -0.41
CALCOCO2-228ENST00000576582 TMCO2Q7Z6W1 182 aaPredicted RBP12.52□□□□□ -0.41
CALCOCO2-228ENST00000576582 HDAC6Q9UBN7 1215 aa12.52□□□□□ -0.41
CALCOCO2-228ENST00000576582 ABCB11O95342 1321 aa12.52□□□□□ -0.41
CALCOCO2-228ENST00000576582 TANC1Q9C0D5 1861 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 FAM86C2PA6NEL3 165 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 PPFIA4O75335 1185 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 KCNA5P22460 613 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 PSEN2P49810 448 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 PTPROQ16827 1216 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 MCMDC2Q4G0Z9 681 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 CCDC178Q5BJE1 867 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 MFSD6Q6ZSS7 791 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 CHST3Q7LGC8 479 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 DGKHQ86XP1 1220 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 PPTC7Q8NI37 304 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 SYTL5Q8TDW5 730 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 SAMD11Q96NU1 681 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 TAAR1Q96RJ0 339 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 RMDN3Q96TC7 470 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 DDX41Q9UJV9 622 aaKnown RBP12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 MTUS1Q9ULD2 1270 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 EMSYQ7Z589 1322 aa12.51□□□□□ -0.41
CALCOCO2-228ENST00000576582 GRXCR2A6NFK2 248 aa12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 HAS3O00219 553 aa12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 LGR5O75473 907 aa12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 F2P00734 622 aa12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 AMHP03971 560 aa12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 HSPD1P10809 573 aaKnown RBP12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 SSTR3P32745 418 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 MFSD10Q14728 455 aa12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 TRIM71Q2Q1W2 868 aaKnown RBP12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 USH1GQ495M9 461 aa12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 ZNF618Q5T7W0 954 aa12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 PTCRAQ6ISU1 281 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 KCNV1Q6PIU1 500 aa12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 TRAF7Q6Q0C0 670 aa12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 FBXO22Q8NEZ5 403 aa12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 MRPL38Q96DV4 380 aaKnown RBP12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 RNF41Q9H4P4 317 aaPredicted RBP12.5□□□□□ -0.41
CALCOCO2-228ENST00000576582 A0A0D9SFI3 127 aa12.49□□□□□ -0.41
CALCOCO2-228ENST00000576582 HOXD8P13378 290 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms