RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TPRNQ4KMQ1 711 aa18.81■□□□□ 0.6
TPM1-219ENST00000559397 AXDND1Q5T1B0 1012 aaPredicted RBP18.81■□□□□ 0.6
TPM1-219ENST00000559397 SOCS4Q8WXH5 440 aa18.81■□□□□ 0.6
TPM1-219ENST00000559397 ANO3Q9BYT9 981 aa18.81■□□□□ 0.6
TPM1-219ENST00000559397 PXMP2Q9NR77 195 aa18.81■□□□□ 0.6
TPM1-219ENST00000559397 SYCE3A1L190 88 aa18.8■□□□□ 0.6
TPM1-219ENST00000559397 FAM205CA6NFA0 338 aa18.8■□□□□ 0.6
TPM1-219ENST00000559397 HOXC6P09630 235 aa18.8■□□□□ 0.6
TPM1-219ENST00000559397 LRSAM1Q6UWE0 723 aa18.8■□□□□ 0.6
TPM1-219ENST00000559397 KRT25Q7Z3Z0 450 aa18.8■□□□□ 0.6
TPM1-219ENST00000559397 DNERQ8NFT8 737 aa18.8■□□□□ 0.6
TPM1-219ENST00000559397 CRYGNQ8WXF5 182 aa18.8■□□□□ 0.6
TPM1-219ENST00000559397 RMDN3Q96TC7 470 aa18.8■□□□□ 0.6
TPM1-219ENST00000559397 NUDT12Q9BQG2 462 aa18.8■□□□□ 0.6
TPM1-219ENST00000559397 DDX19AQ9NUU7 478 aaKnown RBP18.8■□□□□ 0.6
TPM1-219ENST00000559397 MYH7BA7E2Y1 1941 aa18.8■□□□□ 0.6
TPM1-219ENST00000559397 FOXN1O15353 648 aa18.79■□□□□ 0.6
TPM1-219ENST00000559397 EDIL3O43854 480 aa18.79■□□□□ 0.6
TPM1-219ENST00000559397 PIK3AP1Q6ZUJ8 805 aa18.79■□□□□ 0.6
TPM1-219ENST00000559397 DPP9Q86TI2 863 aa18.79■□□□□ 0.6
TPM1-219ENST00000559397 NPLOC4Q8TAT6 608 aa18.79■□□□□ 0.6
TPM1-219ENST00000559397 DACT1Q9NYF0 836 aa18.79■□□□□ 0.6
TPM1-219ENST00000559397 GABRQQ9UN88 632 aa18.79■□□□□ 0.6
TPM1-219ENST00000559397 DIS3Q9Y2L1 958 aaKnown RBP18.79■□□□□ 0.6
TPM1-219ENST00000559397 CCDC194A0A1B0GVG4 234 aa18.79■□□□□ 0.6
TPM1-219ENST00000559397 NR1I2O75469 434 aa18.79■□□□□ 0.6
TPM1-219ENST00000559397 HSPA1AP0DMV8 641 aaKnown RBP18.79■□□□□ 0.6
TPM1-219ENST00000559397 HSPA1BP0DMV9 641 aaKnown RBP18.79■□□□□ 0.6
TPM1-219ENST00000559397 HSPA8P11142 646 aaKnown RBP18.79■□□□□ 0.6
TPM1-219ENST00000559397 SREBF1P36956 1147 aa18.79■□□□□ 0.6
TPM1-219ENST00000559397 NONOQ15233 471 aaKnown RBP eCLIP18.79■□□□□ 0.6
TPM1-219ENST00000559397 ENGASEQ8NFI3 743 aa18.79■□□□□ 0.6
TPM1-219ENST00000559397 NSUN6Q8TEA1 469 aaKnown RBP18.79■□□□□ 0.6
TPM1-219ENST00000559397 GOLPH3LQ9H4A5 285 aa18.79■□□□□ 0.6
TPM1-219ENST00000559397 ADD3Q9UEY8 706 aaKnown RBP18.79■□□□□ 0.6
TPM1-219ENST00000559397 GNRH1P01148 92 aa18.78■□□□□ 0.6
TPM1-219ENST00000559397 EIF2AK2P19525 551 aaKnown RBP18.78■□□□□ 0.6
TPM1-219ENST00000559397 TRAPPC10P48553 1259 aa18.78■□□□□ 0.6
TPM1-219ENST00000559397 ALDH5A1P51649 535 aaPredicted RBP18.78■□□□□ 0.6
TPM1-219ENST00000559397 ARHGEF16Q5VV41 709 aa18.78■□□□□ 0.6
TPM1-219ENST00000559397 ZNF467Q7Z7K2 595 aaPredicted RBP18.78■□□□□ 0.6
TPM1-219ENST00000559397 TBCKQ8TEA7 893 aa18.78■□□□□ 0.6
TPM1-219ENST00000559397 PDCD2LQ9BRP1 358 aa18.78■□□□□ 0.6
TPM1-219ENST00000559397 PCDHB6Q9Y5E3 794 aa18.78■□□□□ 0.6
TPM1-219ENST00000559397 CMA1P23946 247 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 EDNRBP24530 442 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 RGS2P41220 211 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 FLT3LGP49771 235 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 UBXN2AP68543 259 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 PRKCZQ05513 592 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 SNW1Q13573 536 aaKnown RBP18.77■□□□□ 0.6
TPM1-219ENST00000559397 PGM5Q15124 567 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 INF2Q27J81 1249 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 FSIP1Q8NA03 581 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 IL31RAQ8NI17 732 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 MRPS27Q92552 414 aaKnown RBP18.77■□□□□ 0.6
TPM1-219ENST00000559397 MAML3Q96JK9 1138 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 CLSTN2Q9H4D0 955 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 EHMT1Q9H9B1 1298 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 SRRDQ9UH36 339 aa18.77■□□□□ 0.6
TPM1-219ENST00000559397 NOL7Q9UMY1 257 aaKnown RBP18.77■□□□□ 0.6
TPM1-219ENST00000559397 LOC102724159A0A0B4J2E5 919 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 LRRC37A2A6NM11 1700 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 CYP2B6P20813 491 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 HOXD10P28358 340 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 MARCKSP29966 332 aaPredicted RBP18.76■□□□□ 0.59
TPM1-219ENST00000559397 ARHGAP4P98171 946 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 FAM160A1Q05DH4 1040 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 PWP2Q15269 919 aaKnown RBP18.76■□□□□ 0.59
TPM1-219ENST00000559397 L1TD1Q5T7N2 865 aaKnown RBP18.76■□□□□ 0.59
TPM1-219ENST00000559397 RBM43Q6ZSC3 357 aaKnown RBP18.76■□□□□ 0.59
TPM1-219ENST00000559397 MORC4Q8TE76 937 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 IWS1Q96ST2 819 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 NUP62CLQ9H1M0 184 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 SLC5A4Q9NY91 659 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 CEP131Q9UPN4 1083 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 CASP8AP2Q9UKL3 1982 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 FAM237AA0A1B0GTK4 181 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 CUTAO60888 179 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 IGHA2P01877 340 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 CYP3A4P08684 503 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 XRCC5P13010 732 aaKnown RBP18.76■□□□□ 0.59
TPM1-219ENST00000559397 MRE11P49959 708 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 ARHGEF6Q15052 776 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 CCDC73Q6ZRK6 1079 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 VSIG10LQ86VR7 867 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 APBA2Q99767 749 aa18.76■□□□□ 0.59
TPM1-219ENST00000559397 BMP15O95972 392 aa18.75■□□□□ 0.59
TPM1-219ENST00000559397 NR3C2P08235 984 aa18.75■□□□□ 0.59
TPM1-219ENST00000559397 USP11P51784 963 aa18.75■□□□□ 0.59
TPM1-219ENST00000559397 MRPS9P82933 396 aaKnown RBP18.75■□□□□ 0.59
TPM1-219ENST00000559397 PCNX4Q63HM2 1172 aa18.75■□□□□ 0.59
TPM1-219ENST00000559397 MAMDC4Q6UXC1 1216 aa18.75■□□□□ 0.59
TPM1-219ENST00000559397 FMR1NBQ8N0W7 255 aaPredicted RBP18.75■□□□□ 0.59
TPM1-219ENST00000559397 FLRT1Q9NZU1 646 aa18.75■□□□□ 0.59
TPM1-219ENST00000559397 MCM3APO60318 1980 aa18.75■□□□□ 0.59
TPM1-219ENST00000559397 WNT7AO00755 349 aa18.74■□□□□ 0.59
TPM1-219ENST00000559397 CTCFP49711 727 aaPredicted RBP18.74■□□□□ 0.59
TPM1-219ENST00000559397 IRF5Q13568 498 aa18.74■□□□□ 0.59
TPM1-219ENST00000559397 TTC38Q5R3I4 469 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms