RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 PALD1Q9ULE6 856 aa17.13■□□□□ 0.33
SHISA9-203ENST00000558583 PPFIA2O75334 1257 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 GRAMD1CQ8IYS0 662 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 ZNF654Q8IZM8 581 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 FAM149B1Q96BN6 582 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 C1orf112Q9NSG2 853 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 DENND3A2RUS2 1198 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 HDLBPQ00341 1268 aaKnown RBP17.12■□□□□ 0.33
SHISA9-203ENST00000558583 YIPF2Q9BWQ6 316 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 CFLARO15519 480 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.12■□□□□ 0.33
SHISA9-203ENST00000558583 SCARA5Q6ZMJ2 495 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 BAG5Q9UL15 447 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 ATP8A1Q9Y2Q0 1164 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 RRP15Q9Y3B9 282 aaKnown RBP17.12■□□□□ 0.33
SHISA9-203ENST00000558583 BFSP1Q12934 665 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 YAF2Q8IY57 180 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 TRIM58Q8NG06 486 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 ATP6V1E2Q96A05 226 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 COA7Q96BR5 231 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 TSKSQ9UJT2 592 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
SHISA9-203ENST00000558583 SART1O43290 800 aaKnown RBP17.11■□□□□ 0.33
SHISA9-203ENST00000558583 PDE6CP51160 858 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 EPHB1P54762 984 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 NLRP4Q96MN2 994 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 LZTS2Q9BRK4 669 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 SLC38A10Q9HBR0 1119 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 SDCCAG3Q96C92 435 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 LLPHQ9BRT6 129 aaKnown RBP17.11■□□□□ 0.33
SHISA9-203ENST00000558583 ASAP1Q9ULH1 1129 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 PPP1R2P41236 205 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 PGBD3Q8N328 593 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 ZNF496Q96IT1 587 aaPredicted RBP17.11■□□□□ 0.33
SHISA9-203ENST00000558583 ZSCAN10Q96SZ4 725 aaPredicted RBP17.11■□□□□ 0.33
SHISA9-203ENST00000558583 EPB41L5Q9HCM4 733 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 PIM2Q9P1W9 311 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 PCDHA12Q9UN75 941 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 MRFAP1Q9Y605 127 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 MOCS3O95396 460 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 SMAD1Q15797 465 aaKnown RBP17.11■□□□□ 0.33
SHISA9-203ENST00000558583 OR8K1Q8NGG5 319 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 KIAA1468Q9P260 1216 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.11■□□□□ 0.33
SHISA9-203ENST00000558583 SLC12A6Q9UHW9 1150 aa17.11■□□□□ 0.33
SHISA9-203ENST00000558583 PFDN6O15212 129 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 USP14P54578 494 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 PCIF1Q9H4Z3 704 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 WDR62O43379 1518 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 SGSM2O43147 1006 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 LRRC41Q15345 812 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 INTS9Q9NV88 658 aaKnown RBP17.1■□□□□ 0.33
SHISA9-203ENST00000558583 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.1■□□□□ 0.33
SHISA9-203ENST00000558583 USP19O94966 1318 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 NEMP1O14524 444 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 CASP14P31944 242 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 HOMER3Q9NSC5 361 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 MAP10Q9P2G4 905 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 IPO11Q9UI26 975 aaKnown RBP17.1■□□□□ 0.33
SHISA9-203ENST00000558583 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 IBTKQ9P2D0 1353 aaPredicted RBP17.1■□□□□ 0.33
SHISA9-203ENST00000558583 KCNQ3O43525 872 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 NCF2P19878 526 aaPredicted RBP17.1■□□□□ 0.33
SHISA9-203ENST00000558583 GJA10Q969M2 543 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 TOM1L1O75674 476 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 ADD1P35611 737 aaKnown RBP17.1■□□□□ 0.33
SHISA9-203ENST00000558583 MYOCDQ8IZQ8 938 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 CCNYQ8ND76 341 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 TPCN1Q9ULQ1 816 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.1■□□□□ 0.33
SHISA9-203ENST00000558583 LRRN2O75325 713 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 HADHQ16836 314 aaKnown RBP17.1■□□□□ 0.33
SHISA9-203ENST00000558583 FAM117BQ6P1L5 589 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 FGD4Q96M96 766 aa17.1■□□□□ 0.33
SHISA9-203ENST00000558583 RBL2Q08999 1139 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 HAUS1Q96CS2 278 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 Q9H521 79 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 ATP8A2Q9NTI2 1148 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 RAPGEF6Q8TEU7 1601 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 FTCDO95954 541 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 TFAMQ00059 246 aaKnown RBP17.09■□□□□ 0.33
SHISA9-203ENST00000558583 EXT2Q93063 718 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 hCG_2014768A0A024R1R8 64 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 ARHGAP4P98171 946 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 FAM178BQ8IXR5 827 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 SLC24A3Q9HC58 644 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 NVLO15381 856 aaKnown RBP17.09■□□□□ 0.33
SHISA9-203ENST00000558583 TCP11X2Q5H9J9 407 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 SYMPKQ92797 1274 aaKnown RBP17.09■□□□□ 0.33
SHISA9-203ENST00000558583 NXF1Q9UBU9 619 aaKnown RBP17.09■□□□□ 0.33
SHISA9-203ENST00000558583 UPP2O95045 317 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 IQCB1Q15051 598 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 ZNF341Q9BYN7 854 aa17.09■□□□□ 0.33
SHISA9-203ENST00000558583 RPN1P04843 607 aaKnown RBP17.08■□□□□ 0.33
SHISA9-203ENST00000558583 TTLL6Q8N841 843 aa17.08■□□□□ 0.33
SHISA9-203ENST00000558583 MARCH10Q8NA82 808 aaPredicted RBP17.08■□□□□ 0.33
SHISA9-203ENST00000558583 ADD3Q9UEY8 706 aaKnown RBP17.08■□□□□ 0.33
SHISA9-203ENST00000558583 F5H423 210 aaPredicted RBP17.08■□□□□ 0.33
SHISA9-203ENST00000558583 HOXD10P28358 340 aa17.08■□□□□ 0.33
SHISA9-203ENST00000558583 ASPHQ12797 758 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms