RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 RBM27Q9P2N5 1060 aaKnown RBP22.72■■□□□ 1.23
HIF1A-211ENST00000557446 ZMYND8Q9ULU4 1186 aaPredicted RBP22.72■■□□□ 1.23
HIF1A-211ENST00000557446 ATP11BQ9Y2G3 1177 aa22.72■■□□□ 1.23
HIF1A-211ENST00000557446 SCG2P13521 617 aa22.71■■□□□ 1.23
HIF1A-211ENST00000557446 STK3Q13188 491 aa22.71■■□□□ 1.23
HIF1A-211ENST00000557446 VSIG10LQ86VR7 867 aa22.71■■□□□ 1.23
HIF1A-211ENST00000557446 RNF26Q9BY78 433 aaPredicted RBP22.71■■□□□ 1.23
HIF1A-211ENST00000557446 MRVI1Q9Y6F6 885 aa22.71■■□□□ 1.23
HIF1A-211ENST00000557446 PRPF3O43395 683 aaKnown RBP22.7■■□□□ 1.22
HIF1A-211ENST00000557446 ZEB2O60315 1214 aa22.7■■□□□ 1.22
HIF1A-211ENST00000557446 PPFIA3O75145 1194 aa22.7■■□□□ 1.22
HIF1A-211ENST00000557446 IFNAR1P17181 557 aa22.7■■□□□ 1.22
HIF1A-211ENST00000557446 SYN1P17600 705 aa22.7■■□□□ 1.22
HIF1A-211ENST00000557446 AK2P54819 239 aa22.7■■□□□ 1.22
HIF1A-211ENST00000557446 AKAP17AQ02040 695 aaKnown RBP22.7■■□□□ 1.22
HIF1A-211ENST00000557446 C1orf53Q5VUE5 145 aa22.7■■□□□ 1.22
HIF1A-211ENST00000557446 CXCL17Q6UXB2 119 aa22.7■■□□□ 1.22
HIF1A-211ENST00000557446 ZFP91Q96JP5 570 aaPredicted RBP22.7■■□□□ 1.22
HIF1A-211ENST00000557446 SLC26A6Q9BXS9 759 aa22.7■■□□□ 1.22
HIF1A-211ENST00000557446 MYH7BA7E2Y1 1941 aa22.69■■□□□ 1.22
HIF1A-211ENST00000557446 SPDYE3A6NKU9 549 aa22.69■■□□□ 1.22
HIF1A-211ENST00000557446 RGS20O76081 388 aa22.69■■□□□ 1.22
HIF1A-211ENST00000557446 CPT1AP50416 773 aa22.69■■□□□ 1.22
HIF1A-211ENST00000557446 ADCY7P51828 1080 aa22.69■■□□□ 1.22
HIF1A-211ENST00000557446 PKN1Q16512 942 aa22.69■■□□□ 1.22
HIF1A-211ENST00000557446 LY6KQ17RY6 165 aa22.69■■□□□ 1.22
HIF1A-211ENST00000557446 VTI1AQ96AJ9 217 aa22.69■■□□□ 1.22
HIF1A-211ENST00000557446 ALDH8A1Q9H2A2 487 aaPredicted RBP22.69■■□□□ 1.22
HIF1A-211ENST00000557446 RIC8AQ9NPQ8 531 aa22.69■■□□□ 1.22
HIF1A-211ENST00000557446 LTBP2Q14767 1821 aa22.68■■□□□ 1.22
HIF1A-211ENST00000557446 ELP1O95163 1332 aa22.68■■□□□ 1.22
HIF1A-211ENST00000557446 CPLX1O14810 134 aa22.68■■□□□ 1.22
HIF1A-211ENST00000557446 GH1P01241 217 aa22.68■■□□□ 1.22
HIF1A-211ENST00000557446 MRPS9P82933 396 aaKnown RBP22.68■■□□□ 1.22
HIF1A-211ENST00000557446 ANKRD1Q15327 319 aa22.68■■□□□ 1.22
HIF1A-211ENST00000557446 DDX41Q9UJV9 622 aaKnown RBP22.68■■□□□ 1.22
HIF1A-211ENST00000557446 TPCN1Q9ULQ1 816 aa22.68■■□□□ 1.22
HIF1A-211ENST00000557446 SMCO2A6NFE2 343 aa22.67■■□□□ 1.22
HIF1A-211ENST00000557446 STAM2O75886 525 aa22.67■■□□□ 1.22
HIF1A-211ENST00000557446 CABYRO75952 493 aa22.67■■□□□ 1.22
HIF1A-211ENST00000557446 ARHGAP1Q07960 439 aa22.67■■□□□ 1.22
HIF1A-211ENST00000557446 GNPTABQ3T906 1256 aa22.67■■□□□ 1.22
HIF1A-211ENST00000557446 BRDTQ58F21 947 aaPredicted RBP22.67■■□□□ 1.22
HIF1A-211ENST00000557446 PCNX4Q63HM2 1172 aa22.67■■□□□ 1.22
HIF1A-211ENST00000557446 TRIM22Q8IYM9 498 aa22.67■■□□□ 1.22
HIF1A-211ENST00000557446 PCDHA6Q9UN73 950 aa22.67■■□□□ 1.22
HIF1A-211ENST00000557446 PCDHA8Q9Y5H6 950 aa22.67■■□□□ 1.22
HIF1A-211ENST00000557446 DOCK5Q9H7D0 1870 aa22.66■■□□□ 1.22
HIF1A-211ENST00000557446 A0A0U1RQG5 324 aaPredicted RBP22.66■■□□□ 1.22
HIF1A-211ENST00000557446 PQBP1O60828 265 aaKnown RBP22.66■■□□□ 1.22
HIF1A-211ENST00000557446 NEK4P51957 841 aa22.66■■□□□ 1.22
HIF1A-211ENST00000557446 TLE2Q04725 743 aa22.66■■□□□ 1.22
HIF1A-211ENST00000557446 KCNV1Q6PIU1 500 aa22.66■■□□□ 1.22
HIF1A-211ENST00000557446 CPLX2Q6PUV4 134 aaKnown RBP22.66■■□□□ 1.22
HIF1A-211ENST00000557446 TEX2Q8IWB9 1127 aa22.66■■□□□ 1.22
HIF1A-211ENST00000557446 CCDC12Q8WUD4 166 aaPredicted RBP22.66■■□□□ 1.22
HIF1A-211ENST00000557446 SLKQ9H2G2 1235 aaPredicted RBP22.66■■□□□ 1.22
HIF1A-211ENST00000557446 EHMT1Q9H9B1 1298 aa22.66■■□□□ 1.22
HIF1A-211ENST00000557446 POLR3EQ9NVU0 708 aa22.66■■□□□ 1.22
HIF1A-211ENST00000557446 MYL3P08590 195 aa22.65■■□□□ 1.22
HIF1A-211ENST00000557446 SCRN1Q12765 414 aa22.65■■□□□ 1.22
HIF1A-211ENST00000557446 XRRA1Q6P2D8 792 aa22.65■■□□□ 1.22
HIF1A-211ENST00000557446 CHRDL2Q6WN34 429 aa22.65■■□□□ 1.22
HIF1A-211ENST00000557446 INPP4AQ96PE3 977 aaPredicted RBP22.65■■□□□ 1.22
HIF1A-211ENST00000557446 GLT8D2Q9H1C3 349 aa22.65■■□□□ 1.22
HIF1A-211ENST00000557446 RTEL1Q9NZ71 1219 aa22.65■■□□□ 1.22
HIF1A-211ENST00000557446 PCDH10Q9P2E7 1040 aa22.65■■□□□ 1.22
HIF1A-211ENST00000557446 MROH7Q68CQ1 1323 aa22.64■■□□□ 1.22
HIF1A-211ENST00000557446 SCN10AQ9Y5Y9 1956 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 ESYT2A0FGR8 921 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 A6NJR5 290 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 ARVCFO00192 962 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 UBA1P22314 1058 aaKnown RBP22.64■■□□□ 1.21
HIF1A-211ENST00000557446 PURAQ00577 322 aaKnown RBP22.64■■□□□ 1.21
HIF1A-211ENST00000557446 SSRP1Q08945 709 aaKnown RBP22.64■■□□□ 1.21
HIF1A-211ENST00000557446 AP3B2Q13367 1082 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 CCDC148Q8NFR7 591 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 AFG1LQ8WV93 481 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 PGBD1Q96JS3 809 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 ANO3Q9BYT9 981 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 ZMYND12Q9H0C1 365 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 PRDM5Q9NQX1 630 aaPredicted RBP22.64■■□□□ 1.21
HIF1A-211ENST00000557446 PDLIM7Q9NR12 457 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 TMEM260Q9NX78 707 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 PRKAG2Q9UGJ0 569 aa22.64■■□□□ 1.21
HIF1A-211ENST00000557446 FIBPO43427 364 aa22.63■■□□□ 1.21
HIF1A-211ENST00000557446 PFKFB2O60825 505 aa22.63■■□□□ 1.21
HIF1A-211ENST00000557446 DEXIO95424 95 aa22.63■■□□□ 1.21
HIF1A-211ENST00000557446 MMP3P08254 477 aa22.63■■□□□ 1.21
HIF1A-211ENST00000557446 TGFB3P10600 412 aa22.63■■□□□ 1.21
HIF1A-211ENST00000557446 CLK2P49760 499 aaKnown RBP22.63■■□□□ 1.21
HIF1A-211ENST00000557446 PSMC6P62333 389 aa22.63■■□□□ 1.21
HIF1A-211ENST00000557446 ITGA7Q13683 1181 aa22.63■■□□□ 1.21
HIF1A-211ENST00000557446 ANKRD33Q7Z3H0 272 aa22.63■■□□□ 1.21
HIF1A-211ENST00000557446 DHX37Q8IY37 1157 aaKnown RBP22.63■■□□□ 1.21
HIF1A-211ENST00000557446 EMID1Q96A84 441 aaPredicted RBP22.63■■□□□ 1.21
HIF1A-211ENST00000557446 C22orf23Q9BZE7 217 aa22.63■■□□□ 1.21
HIF1A-211ENST00000557446 C6orf50Q9HD87 102 aa22.63■■□□□ 1.21
HIF1A-211ENST00000557446 VPS54Q9P1Q0 977 aa22.63■■□□□ 1.21
HIF1A-211ENST00000557446 SORBS3O60504 671 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms