RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 NLRP10Q86W26 655 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 RIOX2Q8IUF8 465 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 TEX2Q8IWB9 1127 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 TMEFF1Q8IYR6 380 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 THAP3Q8WTV1 239 aaPredicted RBP4.63□□□□□ -1.67
SCFD1-213ENST00000554776 PEX11GQ96HA9 241 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 MRFAP1L1Q96HT8 127 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 RXFP1Q9HBX9 757 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 FBXL7Q9UJT9 491 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 DBR1Q9UK59 544 aaKnown RBP4.63□□□□□ -1.67
SCFD1-213ENST00000554776 CNOT6Q9ULM6 557 aaKnown RBP4.63□□□□□ -1.67
SCFD1-213ENST00000554776 PLA2G2DQ9UNK4 145 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 KCTD3Q9Y597 815 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 IRAK3Q9Y616 596 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 X6R8D5 127 aa4.63□□□□□ -1.67
SCFD1-213ENST00000554776 TRBV23-1A0A0A0MS06 115 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 TLDC2A0PJX2 215 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 BLACEA4D250 179 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 ZBTB7AO95365 584 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 PI3P19957 117 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 IGFBP6P24592 240 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-213ENST00000554776 FPR2P25090 351 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 BCL6P41182 706 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 NCKAP1LP55160 1127 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 LSAMPQ13449 338 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 SLC9A5Q14940 896 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 ZNF385BQ569K4 471 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 FAM209AQ5JX71 171 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 MROH9Q5TGP6 573 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 CIAPIN1Q6FI81 312 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 NOP9Q86U38 636 aaKnown RBP4.62□□□□□ -1.67
SCFD1-213ENST00000554776 JAZF1Q86VZ6 243 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 DCP2Q8IU60 420 aaKnown RBP4.62□□□□□ -1.67
SCFD1-213ENST00000554776 ZSCAN18Q8TBC5 510 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-213ENST00000554776 KISS1RQ969F8 398 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-213ENST00000554776 RNF38Q9H0F5 515 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 KANSL2Q9H9L4 492 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 EPB41L4AQ9HCS5 686 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-213ENST00000554776 GPR27Q9NS67 375 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 BTG4Q9NY30 223 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 PTCH2Q9Y6C5 1203 aa4.62□□□□□ -1.67
SCFD1-213ENST00000554776 H7BY64 318 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 RFXAPO00287 272 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 NUAK1O60285 661 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 BUB1BO60566 1050 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-213ENST00000554776 ASGR2P07307 311 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 C6orf222P0C671 652 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-213ENST00000554776 PFKLP17858 780 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 SLC6A11P48066 632 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 SUMO1P63165 101 aaKnown RBP4.61□□□□□ -1.67
SCFD1-213ENST00000554776 SQSTM1Q13501 440 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 TARBP2Q15633 366 aaKnown RBP4.61□□□□□ -1.67
SCFD1-213ENST00000554776 ZC3H12BQ5HYM0 836 aaKnown RBP4.61□□□□□ -1.67
SCFD1-213ENST00000554776 RSPO2Q6UXX9 243 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-213ENST00000554776 ZNF662Q6ZS27 426 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 USP53Q70EK8 1073 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 CEP68Q76N32 757 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 AMIGO3Q86WK7 504 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 SCUBE1Q8IWY4 988 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 DCAF4Q8WV16 495 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 ALG3Q92685 438 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 TRMT2BQ96GJ1 504 aaKnown RBP4.61□□□□□ -1.67
SCFD1-213ENST00000554776 TMEM169Q96HH4 297 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 CDC6Q99741 560 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 MRPS23Q9Y3D9 190 aaKnown RBP4.61□□□□□ -1.67
SCFD1-213ENST00000554776 SIT1Q9Y3P8 196 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 PCDHA2Q9Y5H9 948 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 MRPL42Q9Y6G3 142 aaKnown RBP4.61□□□□□ -1.67
SCFD1-213ENST00000554776 CADPSQ9ULU8 1353 aa4.61□□□□□ -1.67
SCFD1-213ENST00000554776 SGSM2O43147 1006 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 MSCO60682 206 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 NCAM1P13591 858 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 ATF2P15336 505 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 PMLP29590 882 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 STYK1Q6J9G0 422 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 SPOCD1Q6ZMY3 1216 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 LCNL1Q6ZST4 164 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 FAM129CQ86XR2 697 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 SIAH1Q8IUQ4 282 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 NLGN1Q8N2Q7 840 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 ZSWIM2Q8NEG5 633 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 PANK1Q8TE04 598 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 SH3TC2Q8TF17 1288 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 CPA5Q8WXQ8 436 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 SEC14L1Q92503 715 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 DACT3Q96B18 629 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-213ENST00000554776 RNPC3Q96LT9 517 aaKnown RBP4.6□□□□□ -1.67
SCFD1-213ENST00000554776 ZFYVE21Q9BQ24 234 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 DHRS4Q9BTZ2 278 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 PHF20Q9BVI0 1012 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 AP5M1Q9H0R1 490 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 IRF2BPLQ9H1B7 796 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 CDIP1Q9H305 208 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 BCAS3Q9H6U6 928 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 TMA7Q9Y2S6 64 aaKnown RBP4.6□□□□□ -1.67
SCFD1-213ENST00000554776 TBX22Q9Y458 520 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 ASXL2Q76L83 1435 aa4.6□□□□□ -1.67
SCFD1-213ENST00000554776 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms