RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 NBPF20Q3BBV1 942 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 ARHGEF16Q5VV41 709 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 KCNV1Q6PIU1 500 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 STOX1Q6ZVD7 989 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 RALYLQ86SE5 291 aaKnown RBP7.68□□□□□ -1.18
SLIRP-203ENST00000554074 MAFAQ8NHW3 353 aaPredicted RBP7.68□□□□□ -1.18
SLIRP-203ENST00000554074 MYLIPQ8WY64 445 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 COPS5Q92905 334 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 VWCEQ96DN2 955 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 MAP3K14Q99558 947 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 VAT1LQ9HCJ6 419 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 TRMT13Q9NUP7 481 aaKnown RBP7.68□□□□□ -1.18
SLIRP-203ENST00000554074 CXXC1Q9P0U4 656 aaPredicted RBP7.68□□□□□ -1.18
SLIRP-203ENST00000554074 DDX41Q9UJV9 622 aaKnown RBP7.68□□□□□ -1.18
SLIRP-203ENST00000554074 PCDHA1Q9Y5I3 950 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 CDH23Q9H251 3354 aa7.68□□□□□ -1.18
SLIRP-203ENST00000554074 SIP14410 1827 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 PNMA6FA0A0J9YX94 578 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 E7EWF7 191 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 CFBP00751 764 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 TGFB3P10600 412 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 CYP2C9P11712 490 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 HOXD8P13378 290 aaPredicted RBP7.67□□□□□ -1.18
SLIRP-203ENST00000554074 CASTP20810 708 aaKnown RBP7.67□□□□□ -1.18
SLIRP-203ENST00000554074 SMARCA1P28370 1054 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 CCL23P55773 120 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 RBL2Q08999 1139 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 TROAPQ12815 778 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 BFSP2Q13515 415 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 LAMC2Q13753 1193 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 GRIN2CQ14957 1233 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 WTAPQ15007 396 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 DGKDQ16760 1214 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 SLC35G1Q2M3R5 365 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 SEPT14Q6ZU15 432 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 MB21D2Q8IYB1 491 aaPredicted RBP7.67□□□□□ -1.18
SLIRP-203ENST00000554074 CCDC155Q8N6L0 562 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 PPTC7Q8NI37 304 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 CAGE1Q8TC20 777 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 IGDCC4Q8TDY8 1250 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 AFG1LQ8WV93 481 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 PDCD2LQ9BRP1 358 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 KATNAL1Q9BW62 490 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 FOXD4L1Q9NU39 408 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 MSRAQ9UJ68 235 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 PCDHA11Q9Y5I1 949 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 SLC4A7Q9Y6M7 1214 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 WDR81Q562E7 1941 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 FRMPD4Q14CM0 1322 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 PRRC2BQ5JSZ5 2229 aaKnown RBP7.67□□□□□ -1.18
SLIRP-203ENST00000554074 TTC28Q96AY4 2481 aa7.67□□□□□ -1.18
SLIRP-203ENST00000554074 LOXHD1Q8IVV2 1947 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 GRXCR1A8MXD5 290 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 HAS3O00219 553 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 CYTH3O43739 400 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 STAM2O75886 525 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 DDAH1O94760 285 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 PARNO95453 639 aaKnown RBP7.66□□□□□ -1.18
SLIRP-203ENST00000554074 F2P00734 622 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 IQCF3P0C7M6 154 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 ACTN1P12814 892 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 EIF2AK2P19525 551 aaKnown RBP7.66□□□□□ -1.18
SLIRP-203ENST00000554074 KIF5BP33176 963 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 PBX2P40425 430 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 ANTXR2P58335 489 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 PGM5Q15124 567 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 LY6KQ17RY6 165 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 FAM47CQ5HY64 1035 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 OTOP2Q7RTS6 562 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 CATIPQ7Z7H3 387 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 VSIG10LQ86VR7 867 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 TMTC2Q8N394 836 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 RETREG2Q8NC44 543 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 PHOSPHO2Q8TCD6 241 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 KAT2BQ92831 832 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 SCLYQ96I15 445 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 PIGSQ96S52 555 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 GAS2L1Q99501 681 aaPredicted RBP7.66□□□□□ -1.18
SLIRP-203ENST00000554074 SPZ1Q9BXG8 430 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 RBM8AQ9Y5S9 174 aaKnown RBP7.66□□□□□ -1.18
SLIRP-203ENST00000554074 MRVI1Q9Y6F6 885 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 NLRC5Q86WI3 1866 aa7.66□□□□□ -1.18
SLIRP-203ENST00000554074 MYH9P35579 1960 aaKnown RBP7.66□□□□□ -1.18
SLIRP-203ENST00000554074 GCOM1H8Y6P7 765 aaPredicted RBP7.65□□□□□ -1.18
SLIRP-203ENST00000554074 PIK3CDO00329 1044 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 PPFIA4O75335 1185 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 RGS20O76081 388 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 BAIAP3O94812 1187 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 POLR2MP0CAP2 368 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 CCND2P30279 289 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 HOXA13P31271 388 aaPredicted RBP7.65□□□□□ -1.18
SLIRP-203ENST00000554074 GNAQP50148 359 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 PTGISQ16647 500 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 RALGAPA2Q2PPJ7 1873 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 TMEM67Q5HYA8 995 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 CELF3Q5SZQ8 465 aaKnown RBP7.65□□□□□ -1.18
SLIRP-203ENST00000554074 MYSM1Q5VVJ2 828 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 GDF6Q6KF10 455 aaPredicted RBP7.65□□□□□ -1.18
SLIRP-203ENST00000554074 HOMER1Q86YM7 354 aa7.65□□□□□ -1.18
SLIRP-203ENST00000554074 DHX37Q8IY37 1157 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms