RNA–Protein interactions for RNA: ENST00000549757.5

SMARCC2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-207ENST00000549757 BPNT1O95861 308 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 SNRPA1P09661 255 aaKnown RBP6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 U2AF1L5P0DN76 240 aaPredicted RBP6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 COL6A1P12109 1028 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 ALDH1B1P30837 517 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 MAN1A1P33908 653 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 IARSP41252 1262 aaKnown RBP6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 PREPP48147 710 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 LBX1P52954 281 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 EIF6P56537 245 aaKnown RBP6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 U2AF1Q01081 240 aaKnown RBP eCLIP6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 FAAP100Q0VG06 881 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 PPP2R5AQ15172 486 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 TTF1Q15361 905 aaPredicted RBP6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 MAP1SQ66K74 1059 aaPredicted RBP6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 ANKRD34AQ69YU3 496 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 RTKN2Q8IZC4 609 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 SYNE4Q8N205 404 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 NGEFQ8N5V2 710 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 USP26Q9BXU7 913 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 TMX4Q9H1E5 349 aaPredicted RBP6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 PASKQ96RG2 1323 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 CEMIPQ8WUJ3 1361 aa6.68□□□□□ -1.34
SMARCC2-207ENST00000549757 CCDC85CA6NKD9 419 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 TIAF1O95411 115 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 HSP90AA1P07900 732 aaKnown RBP6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 DCTN1Q14203 1278 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 LRRC41Q15345 812 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 MAPRE1Q15691 268 aaKnown RBP6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 DEFB115Q30KQ5 88 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 RPS26P11Q5JNZ5 115 aaPredicted RBP6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 OLFM4Q6UX06 510 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 KIF6Q6ZMV9 814 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 CNTROBQ8N137 903 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 SMG8Q8ND04 991 aaKnown RBP6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 RPGRQ92834 1020 aaKnown RBP6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 PHACTR3Q96KR7 559 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 SPON2Q9BUD6 331 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 BCO2Q9BYV7 579 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 INO80BQ9C086 356 aaPredicted RBP6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 NYXQ9GZU5 481 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 SUGCTQ9HAC7 445 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 PRKAG3Q9UGI9 489 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 ANAPC4Q9UJX5 808 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 LEMD3Q9Y2U8 911 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 LAMB4A4D0S4 1761 aa6.67□□□□□ -1.34
SMARCC2-207ENST00000549757 ALG1L2C9J202 215 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 TCERG1O14776 1098 aaKnown RBP6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 ECEL1O95672 775 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 SCGB1D2O95969 90 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 PMLP29590 882 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 SOX9P48436 509 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 MAP2K1Q02750 393 aaPredicted RBP6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 RAPGEF1Q13905 1077 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 HLFQ16534 295 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 TMEM95Q3KNT9 176 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 PPP4R4Q6NUP7 873 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 KIAA0825Q8IV33 1275 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 GPC2Q8N158 579 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 MYRFLQ96LU7 910 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 GINM1Q9NU53 330 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 EFR3BQ9Y2G0 817 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 RAXQ9Y2V3 346 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 WDR33Q9C0J8 1336 aaKnown RBP6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 NPC1L1Q9UHC9 1359 aa6.66□□□□□ -1.34
SMARCC2-207ENST00000549757 ADAMTSL1Q8N6G6 1762 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 RASSF10A6NK89 507 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 FZD9O00144 591 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 MYL6BP14649 208 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 GPTP24298 496 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 MAOBP27338 520 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 ECE1P42892 770 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 FCGRTP55899 365 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 MCL1Q07820 350 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 EXOSC6Q5RKV6 272 aaKnown RBP6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 NXPE4Q6UWF7 544 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 DDX42Q86XP3 938 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 NIM1KQ8IY84 436 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 SVIPQ8NHG7 77 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 UTP4Q969X6 686 aaKnown RBP6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 PAGR1Q9BTK6 254 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 OSBPL7Q9BZF2 842 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 DDX21Q9NR30 783 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 KBTBD4Q9NVX7 518 aa6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 RRP7AQ9Y3A4 280 aaKnown RBP6.65□□□□□ -1.34
SMARCC2-207ENST00000549757 ABCC12Q96J65 1359 aa6.65□□□□□ -1.35
SMARCC2-207ENST00000549757 SHTN1A0MZ66 631 aa6.64□□□□□ -1.35
SMARCC2-207ENST00000549757 KLRG2A4D1S0 409 aaPredicted RBP6.64□□□□□ -1.35
SMARCC2-207ENST00000549757 GIPC1O14908 333 aa6.64□□□□□ -1.35
SMARCC2-207ENST00000549757 DHX15O43143 795 aaKnown RBP6.64□□□□□ -1.35
SMARCC2-207ENST00000549757 PPIP5K2O43314 1243 aa6.64□□□□□ -1.35
SMARCC2-207ENST00000549757 HTATSF1O43719 755 aaKnown RBP6.64□□□□□ -1.35
SMARCC2-207ENST00000549757 CYP11A1P05108 521 aa6.64□□□□□ -1.35
SMARCC2-207ENST00000549757 HSPA8P11142 646 aaKnown RBP6.64□□□□□ -1.35
SMARCC2-207ENST00000549757 FSTP19883 344 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms