RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 LY6KQ17RY6 165 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 CCDC178Q5BJE1 867 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 EMID1Q96A84 441 aaPredicted RBP15.32■□□□□ 0.04
SCARB1-207ENST00000541661 CPVLQ9H3G5 476 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 LMCD1Q9NZU5 365 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 COL20A1Q9P218 1284 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 MYH6P13533 1939 aa15.32■□□□□ 0.04
SCARB1-207ENST00000541661 COL4A4P53420 1690 aaPredicted RBP15.32■□□□□ 0.04
SCARB1-207ENST00000541661 MYH7BA7E2Y1 1941 aa15.31■□□□□ 0.04
SCARB1-207ENST00000541661 CNKSR3Q6P9H4 555 aa15.31■□□□□ 0.04
SCARB1-207ENST00000541661 SEPT14Q6ZU15 432 aa15.31■□□□□ 0.04
SCARB1-207ENST00000541661 LRRC8DQ7L1W4 858 aa15.31■□□□□ 0.04
SCARB1-207ENST00000541661 MCF2L2Q86YR7 1114 aa15.31■□□□□ 0.04
SCARB1-207ENST00000541661 ADGRF4Q8IZF3 695 aa15.31■□□□□ 0.04
SCARB1-207ENST00000541661 PNMA1Q8ND90 353 aa15.31■□□□□ 0.04
SCARB1-207ENST00000541661 DHX38Q92620 1227 aaKnown RBP15.31■□□□□ 0.04
SCARB1-207ENST00000541661 HLA-CQ95604 372 aa15.31■□□□□ 0.04
SCARB1-207ENST00000541661 RMDN3Q96TC7 470 aa15.31■□□□□ 0.04
SCARB1-207ENST00000541661 ZKSCAN3Q9BRR0 538 aa15.31■□□□□ 0.04
SCARB1-207ENST00000541661 GTF2IRD1Q9UHL9 959 aa15.31■□□□□ 0.04
SCARB1-207ENST00000541661 DDX41Q9UJV9 622 aaKnown RBP15.31■□□□□ 0.04
SCARB1-207ENST00000541661 NEDD4P46934 1319 aa15.31■□□□□ 0.04
SCARB1-207ENST00000541661 ZNF213O14771 459 aa15.3■□□□□ 0.04
SCARB1-207ENST00000541661 CKBP12277 381 aa15.3■□□□□ 0.04
SCARB1-207ENST00000541661 PLA2G5P39877 138 aa15.3■□□□□ 0.04
SCARB1-207ENST00000541661 CHMP4BP1P59074 171 aa15.3■□□□□ 0.04
SCARB1-207ENST00000541661 DGKDQ16760 1214 aa15.3■□□□□ 0.04
SCARB1-207ENST00000541661 SPRED2Q7Z698 418 aa15.3■□□□□ 0.04
SCARB1-207ENST00000541661 IQCA1Q86XH1 822 aa15.3■□□□□ 0.04
SCARB1-207ENST00000541661 MRPL11Q9Y3B7 192 aaKnown RBP15.3■□□□□ 0.04
SCARB1-207ENST00000541661 ABHD14A-ACY1A0A1B0GW23 586 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 LCHNA4D1U4 455 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 TRIM6-TRIM34B2RNG4 842 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 HAS3O00219 553 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 NBNO60934 754 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 EFCAB14O75071 495 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 EIF3JO75822 258 aaKnown RBP15.29■□□□□ 0.04
SCARB1-207ENST00000541661 SDSP20132 328 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 DEFB103AP81534 67 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 GHRHRQ02643 423 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 LAMC2Q13753 1193 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 QRICH1Q2TAL8 776 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 ASPRV1Q53RT3 343 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 CHST3Q7LGC8 479 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 RAD9AQ99638 391 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 KATNAL1Q9BW62 490 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 KAT14Q9H8E8 782 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 HDAC6Q9UBN7 1215 aa15.29■□□□□ 0.04
SCARB1-207ENST00000541661 KDM4AO75164 1064 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 GJB5O95377 273 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 F2P00734 622 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 NR3C2P08235 984 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 HOXD8P13378 290 aaPredicted RBP15.28■□□□□ 0.04
SCARB1-207ENST00000541661 PSEN2P49810 448 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 RRP1P56182 461 aaKnown RBP15.28■□□□□ 0.04
SCARB1-207ENST00000541661 ERVK-21P61565 698 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 PTK7Q13308 1070 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 TCTN1Q2MV58 587 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 ARHGEF16Q5VV41 709 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 TRAF7Q6Q0C0 670 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 FBXO11Q86XK2 927 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 C7orf31Q8N865 590 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 PPTC7Q8NI37 304 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 RILPL2Q969X0 211 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 FAM122AQ96E09 287 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 ZSCAN10Q96SZ4 725 aaPredicted RBP15.28■□□□□ 0.04
SCARB1-207ENST00000541661 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 JMJD4Q9H9V9 463 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 PXMP2Q9NR77 195 aa15.28■□□□□ 0.04
SCARB1-207ENST00000541661 ARIH1Q9Y4X5 557 aaPredicted RBP15.28■□□□□ 0.04
SCARB1-207ENST00000541661 SIP14410 1827 aa15.27■□□□□ 0.04
SCARB1-207ENST00000541661 HSD17B4P51659 736 aa15.27■□□□□ 0.04
SCARB1-207ENST00000541661 IKBKEQ14164 716 aa15.27■□□□□ 0.04
SCARB1-207ENST00000541661 MFSD10Q14728 455 aa15.27■□□□□ 0.04
SCARB1-207ENST00000541661 TRIM71Q2Q1W2 868 aaKnown RBP15.27■□□□□ 0.04
SCARB1-207ENST00000541661 TMCO2Q7Z6W1 182 aaPredicted RBP15.27■□□□□ 0.04
SCARB1-207ENST00000541661 ENAHQ8N8S7 591 aaPredicted RBP15.27■□□□□ 0.04
SCARB1-207ENST00000541661 CRBNQ96SW2 442 aa15.27■□□□□ 0.04
SCARB1-207ENST00000541661 EPHX3Q9H6B9 360 aa15.27■□□□□ 0.04
SCARB1-207ENST00000541661 MAP3K20Q9NYL2 800 aaKnown RBP15.27■□□□□ 0.04
SCARB1-207ENST00000541661 ZSWIM5Q9P217 1185 aa15.27■□□□□ 0.04
SCARB1-207ENST00000541661 OPLAHO14841 1288 aa15.26■□□□□ 0.03
SCARB1-207ENST00000541661 PPFIA4O75335 1185 aa15.26■□□□□ 0.03
SCARB1-207ENST00000541661 PARP1P09874 1014 aaKnown RBP15.26■□□□□ 0.03
SCARB1-207ENST00000541661 EIF2AK2P19525 551 aaKnown RBP15.26■□□□□ 0.03
SCARB1-207ENST00000541661 KIAA0753Q2KHM9 967 aa15.26■□□□□ 0.03
SCARB1-207ENST00000541661 ZNF618Q5T7W0 954 aa15.26■□□□□ 0.03
SCARB1-207ENST00000541661 MYSM1Q5VVJ2 828 aa15.26■□□□□ 0.03
SCARB1-207ENST00000541661 KCNV1Q6PIU1 500 aa15.26■□□□□ 0.03
SCARB1-207ENST00000541661 DHX37Q8IY37 1157 aaKnown RBP15.26■□□□□ 0.03
SCARB1-207ENST00000541661 TGS1Q96RS0 853 aaKnown RBP15.26■□□□□ 0.03
SCARB1-207ENST00000541661 ALG1Q9BT22 464 aa15.26■□□□□ 0.03
SCARB1-207ENST00000541661 LRFN3Q9BTN0 628 aa15.26■□□□□ 0.03
SCARB1-207ENST00000541661 LNPKQ9C0E8 428 aa15.26■□□□□ 0.03
SCARB1-207ENST00000541661 OSBPL3Q9H4L5 887 aa15.26■□□□□ 0.03
SCARB1-207ENST00000541661 SUGCTQ9HAC7 445 aa15.26■□□□□ 0.03
SCARB1-207ENST00000541661 MRVI1Q9Y6F6 885 aa15.26■□□□□ 0.03
SCARB1-207ENST00000541661 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.25■□□□□ 0.03
SCARB1-207ENST00000541661 LINC01553A4QN01 128 aa15.25■□□□□ 0.03
SCARB1-207ENST00000541661 B4E1Z4 1266 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms