RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 SMARCA1P28370 1054 aa20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 GNAQP50148 359 aa20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 CCL23P55773 120 aa20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 COL9A3Q14050 684 aaPredicted RBP20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 RNF20Q5VTR2 975 aa20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 NFRKBQ6P4R8 1299 aa20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 PSRC1Q6PGN9 363 aaPredicted RBP20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 ZNF365Q70YC5 407 aa20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 FCHSD1Q86WN1 690 aa20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 RRP36Q96EU6 259 aaKnown RBP20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 LZTS2Q9BRK4 669 aa20.55■□□□□ 0.88
AP003555.3-201ENST00000534086 SCN10AQ9Y5Y9 1956 aa20.54■□□□□ 0.88
AP003555.3-201ENST00000534086 MMP3P08254 477 aa20.54■□□□□ 0.88
AP003555.3-201ENST00000534086 CALM1P0DP23 149 aa20.54■□□□□ 0.88
AP003555.3-201ENST00000534086 CALM2P0DP24 149 aa20.54■□□□□ 0.88
AP003555.3-201ENST00000534086 CALM3P0DP25 149 aa20.54■□□□□ 0.88
AP003555.3-201ENST00000534086 CYP2C9P11712 490 aa20.54■□□□□ 0.88
AP003555.3-201ENST00000534086 LIFRP42702 1097 aa20.54■□□□□ 0.88
AP003555.3-201ENST00000534086 CHMP4BP1P59074 171 aa20.54■□□□□ 0.88
AP003555.3-201ENST00000534086 PGM5Q15124 567 aa20.54■□□□□ 0.88
AP003555.3-201ENST00000534086 VSIG10LQ86VR7 867 aa20.54■□□□□ 0.88
AP003555.3-201ENST00000534086 PPP1R13LQ8WUF5 828 aa20.54■□□□□ 0.88
AP003555.3-201ENST00000534086 SEMA6BQ9H3T3 888 aa20.54■□□□□ 0.88
AP003555.3-201ENST00000534086 CDC45O75419 566 aa20.53■□□□□ 0.88
AP003555.3-201ENST00000534086 CASTP20810 708 aaKnown RBP20.53■□□□□ 0.88
AP003555.3-201ENST00000534086 CCND2P30279 289 aa20.53■□□□□ 0.88
AP003555.3-201ENST00000534086 PTPN11Q06124 597 aaPredicted RBP20.53■□□□□ 0.88
AP003555.3-201ENST00000534086 KCNV1Q6PIU1 500 aa20.53■□□□□ 0.88
AP003555.3-201ENST00000534086 DHX37Q8IY37 1157 aaKnown RBP20.53■□□□□ 0.88
AP003555.3-201ENST00000534086 CCDC136Q96JN2 1154 aa20.53■□□□□ 0.88
AP003555.3-201ENST00000534086 GUCD1Q96NT3 240 aa20.53■□□□□ 0.88
AP003555.3-201ENST00000534086 LRRC2Q9BYS8 371 aa20.53■□□□□ 0.88
AP003555.3-201ENST00000534086 WNT8AQ9H1J5 351 aa20.53■□□□□ 0.88
AP003555.3-201ENST00000534086 SEC63Q9UGP8 760 aaKnown RBP20.53■□□□□ 0.88
AP003555.3-201ENST00000534086 SLC12A7Q9Y666 1083 aa20.53■□□□□ 0.88
AP003555.3-201ENST00000534086 RGS20O76081 388 aa20.52■□□□□ 0.88
AP003555.3-201ENST00000534086 FGBP02675 491 aa20.52■□□□□ 0.88
AP003555.3-201ENST00000534086 RXRAP19793 462 aa20.52■□□□□ 0.88
AP003555.3-201ENST00000534086 LAMC2Q13753 1193 aa20.52■□□□□ 0.88
AP003555.3-201ENST00000534086 DGKDQ16760 1214 aa20.52■□□□□ 0.88
AP003555.3-201ENST00000534086 RPUSD2Q8IZ73 545 aaKnown RBP20.52■□□□□ 0.88
AP003555.3-201ENST00000534086 SRBD1Q8N5C6 995 aaKnown RBP20.52■□□□□ 0.88
AP003555.3-201ENST00000534086 SLC17A8Q8NDX2 589 aa20.52■□□□□ 0.88
AP003555.3-201ENST00000534086 IL31RAQ8NI17 732 aa20.52■□□□□ 0.88
AP003555.3-201ENST00000534086 EMID1Q96A84 441 aaPredicted RBP20.52■□□□□ 0.88
AP003555.3-201ENST00000534086 PLEKHA8P1O95397 391 aa20.51■□□□□ 0.87
AP003555.3-201ENST00000534086 RASIP1Q5U651 963 aa20.51■□□□□ 0.87
AP003555.3-201ENST00000534086 CMTR1Q8N1G2 835 aaKnown RBP20.51■□□□□ 0.87
AP003555.3-201ENST00000534086 HERVK_113Q902F9 699 aa20.51■□□□□ 0.87
AP003555.3-201ENST00000534086 SCLYQ96I15 445 aa20.51■□□□□ 0.87
AP003555.3-201ENST00000534086 ZFP91Q96JP5 570 aaPredicted RBP20.51■□□□□ 0.87
AP003555.3-201ENST00000534086 NEK1Q96PY6 1258 aa20.51■□□□□ 0.87
AP003555.3-201ENST00000534086 TGFB3P10600 412 aa20.5■□□□□ 0.87
AP003555.3-201ENST00000534086 SYNE3Q6ZMZ3 975 aa20.5■□□□□ 0.87
AP003555.3-201ENST00000534086 RAB11FIP4Q86YS3 637 aa20.5■□□□□ 0.87
AP003555.3-201ENST00000534086 FANCBQ8NB91 859 aa20.5■□□□□ 0.87
AP003555.3-201ENST00000534086 PPTC7Q8NI37 304 aa20.5■□□□□ 0.87
AP003555.3-201ENST00000534086 CUL5Q93034 780 aa20.5■□□□□ 0.87
AP003555.3-201ENST00000534086 CDX2Q99626 313 aaPredicted RBP20.5■□□□□ 0.87
AP003555.3-201ENST00000534086 MTIF3Q9H2K0 278 aaKnown RBP20.5■□□□□ 0.87
AP003555.3-201ENST00000534086 TTYH1Q9H313 450 aaPredicted RBP20.5■□□□□ 0.87
AP003555.3-201ENST00000534086 NOD1Q9Y239 953 aa20.5■□□□□ 0.87
AP003555.3-201ENST00000534086 MYH7BA7E2Y1 1941 aa20.5■□□□□ 0.87
AP003555.3-201ENST00000534086 TMEM265A0A087WTH1 108 aa20.49■□□□□ 0.87
AP003555.3-201ENST00000534086 DNAJB2P25686 324 aa20.49■□□□□ 0.87
AP003555.3-201ENST00000534086 CELF3Q5SZQ8 465 aaKnown RBP20.49■□□□□ 0.87
AP003555.3-201ENST00000534086 MYSM1Q5VVJ2 828 aa20.49■□□□□ 0.87
AP003555.3-201ENST00000534086 OTOP2Q7RTS6 562 aa20.49■□□□□ 0.87
AP003555.3-201ENST00000534086 SGMS1Q86VZ5 419 aa20.49■□□□□ 0.87
AP003555.3-201ENST00000534086 SMARCC2Q8TAQ2 1214 aa20.49■□□□□ 0.87
AP003555.3-201ENST00000534086 KAT2BQ92831 832 aa20.49■□□□□ 0.87
AP003555.3-201ENST00000534086 GRXCR1A8MXD5 290 aa20.48■□□□□ 0.87
AP003555.3-201ENST00000534086 SORBS3O60504 671 aa20.48■□□□□ 0.87
AP003555.3-201ENST00000534086 GGPS1O95749 300 aa20.48■□□□□ 0.87
AP003555.3-201ENST00000534086 SP2Q02086 613 aa20.48■□□□□ 0.87
AP003555.3-201ENST00000534086 PTGISQ16647 500 aa20.48■□□□□ 0.87
AP003555.3-201ENST00000534086 TSGA10IPQ3SY00 556 aa20.48■□□□□ 0.87
AP003555.3-201ENST00000534086 USP17L6PQ6QN14 398 aa20.48■□□□□ 0.87
AP003555.3-201ENST00000534086 CCDC82Q8N4S0 544 aa20.48■□□□□ 0.87
AP003555.3-201ENST00000534086 RETREG2Q8NC44 543 aa20.48■□□□□ 0.87
AP003555.3-201ENST00000534086 SPATA33Q96N06 139 aa20.48■□□□□ 0.87
AP003555.3-201ENST00000534086 KATNAL1Q9BW62 490 aa20.48■□□□□ 0.87
AP003555.3-201ENST00000534086 PPFIA4O75335 1185 aa20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 STAM2O75886 525 aa20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 PSEN2P49810 448 aa20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 MRPS9P82933 396 aaKnown RBP20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 EXOSC10Q01780 885 aaKnown RBP20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 BFSP2Q13515 415 aa20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 KRT32Q14532 448 aa20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 GNPTABQ3T906 1256 aa20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 GDF6Q6KF10 455 aaPredicted RBP20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 DHX32Q7L7V1 743 aaKnown RBP20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 SESTD1Q86VW0 696 aa20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 MICU3Q86XE3 530 aa20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 RASEFQ8IZ41 740 aa20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 GPKOWQ92917 476 aaPredicted RBP eCLIP20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 ALG1Q9BT22 464 aa20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 MLXIPQ9HAP2 919 aa20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 CXXC1Q9P0U4 656 aaPredicted RBP20.47■□□□□ 0.87
AP003555.3-201ENST00000534086 FRMPD4Q14CM0 1322 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms