RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 FBXL16Q8N461 479 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 SRBD1Q8N5C6 995 aaKnown RBP12.72□□□□□ -0.37
CCDC84-205ENST00000528088 TBC1D32Q96NH3 1257 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 SPZ1Q9BXG8 430 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 AMNQ9BXJ7 453 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 AGXT2Q9BYV1 514 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 SLKQ9H2G2 1235 aaPredicted RBP12.72□□□□□ -0.37
CCDC84-205ENST00000528088 RABGEF1Q9UJ41 708 aa12.72□□□□□ -0.37
CCDC84-205ENST00000528088 hCG_1642624A0A1W2PR95 340 aa12.71□□□□□ -0.38
CCDC84-205ENST00000528088 PTPDC1A2A3K4 754 aa12.71□□□□□ -0.38
CCDC84-205ENST00000528088 CYTH3O43739 400 aa12.71□□□□□ -0.38
CCDC84-205ENST00000528088 ST18O60284 1047 aa12.71□□□□□ -0.38
CCDC84-205ENST00000528088 PDIA3P30101 505 aaKnown RBP12.71□□□□□ -0.38
CCDC84-205ENST00000528088 ADD1P35611 737 aaKnown RBP12.71□□□□□ -0.38
CCDC84-205ENST00000528088 TRAF1Q13077 416 aa12.71□□□□□ -0.38
CCDC84-205ENST00000528088 PPP2R5BQ15173 497 aa12.71□□□□□ -0.38
CCDC84-205ENST00000528088 GLMNQ92990 594 aa12.71□□□□□ -0.38
CCDC84-205ENST00000528088 ZNF274Q96GC6 653 aaPredicted RBP12.71□□□□□ -0.38
CCDC84-205ENST00000528088 CALR3Q96L12 384 aaKnown RBP12.71□□□□□ -0.38
CCDC84-205ENST00000528088 RIOX1Q9H6W3 641 aa12.71□□□□□ -0.38
CCDC84-205ENST00000528088 NCOA5Q9HCD5 579 aaKnown RBP12.71□□□□□ -0.38
CCDC84-205ENST00000528088 PCDHA1Q9Y5I3 950 aa12.71□□□□□ -0.38
CCDC84-205ENST00000528088 ABCB11O95342 1321 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 ZNF236Q9UL36 1845 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 PNMA6FA0A0J9YX94 578 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 IGHA2P01877 340 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 PGK2P07205 417 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 HOXC6P09630 235 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 CDC27P30260 824 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 CYP2C19P33261 490 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 MUM1L1Q5H9M0 696 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 LHX8Q68G74 356 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 HEATR3Q7Z4Q2 680 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 TRMT44Q8IYL2 757 aaKnown RBP12.7□□□□□ -0.38
CCDC84-205ENST00000528088 TRPV1Q8NER1 839 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 OGDHLQ9ULD0 1010 aa12.7□□□□□ -0.38
CCDC84-205ENST00000528088 MRPL11Q9Y3B7 192 aaKnown RBP12.7□□□□□ -0.38
CCDC84-205ENST00000528088 PFASO15067 1338 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 NFIBO00712 420 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 GPR37L1O60883 481 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 PPFIA3O75145 1194 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 CALML3P27482 149 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 SMARCA1P28370 1054 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 HABP4Q5JVS0 413 aaKnown RBP12.69□□□□□ -0.38
CCDC84-205ENST00000528088 RNF207Q6ZRF8 634 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 TRIM22Q8IYM9 498 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 ABRAQ8N0Z2 381 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 PHKBQ93100 1093 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 IL17RAQ96F46 866 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 HTATIP2Q9BUP3 242 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 SLC26A6Q9BXS9 759 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 ALDH8A1Q9H2A2 487 aaPredicted RBP12.69□□□□□ -0.38
CCDC84-205ENST00000528088 A1CFQ9NQ94 594 aaKnown RBP12.69□□□□□ -0.38
CCDC84-205ENST00000528088 PCDH10Q9P2E7 1040 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 TPCN1Q9ULQ1 816 aa12.69□□□□□ -0.38
CCDC84-205ENST00000528088 EVCP57679 992 aa12.68□□□□□ -0.38
CCDC84-205ENST00000528088 SLC35G1Q2M3R5 365 aa12.68□□□□□ -0.38
CCDC84-205ENST00000528088 MFSD14CQ5VZR4 134 aa12.68□□□□□ -0.38
CCDC84-205ENST00000528088 MCF2L2Q86YR7 1114 aa12.68□□□□□ -0.38
CCDC84-205ENST00000528088 MTMR8Q96EF0 704 aa12.68□□□□□ -0.38
CCDC84-205ENST00000528088 KIF2CQ99661 725 aa12.68□□□□□ -0.38
CCDC84-205ENST00000528088 V9GY48 417 aaPredicted RBP12.68□□□□□ -0.38
CCDC84-205ENST00000528088 MCM3APO60318 1980 aa12.68□□□□□ -0.38
CCDC84-205ENST00000528088 NID2Q14112 1375 aa12.67□□□□□ -0.38
CCDC84-205ENST00000528088 PPP1R11O60927 126 aaPredicted RBP12.67□□□□□ -0.38
CCDC84-205ENST00000528088 CDKL5O76039 1030 aa12.67□□□□□ -0.38
CCDC84-205ENST00000528088 CFBP00751 764 aa12.67□□□□□ -0.38
CCDC84-205ENST00000528088 SSRP1Q08945 709 aaKnown RBP12.67□□□□□ -0.38
CCDC84-205ENST00000528088 PRAMEF19Q5SWL8 479 aa12.67□□□□□ -0.38
CCDC84-205ENST00000528088 NECAB2Q7Z6G3 386 aa12.67□□□□□ -0.38
CCDC84-205ENST00000528088 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
CCDC84-205ENST00000528088 GPKOWQ92917 476 aaPredicted RBP eCLIP12.67□□□□□ -0.38
CCDC84-205ENST00000528088 TRAIPQ9BWF2 469 aa12.67□□□□□ -0.38
CCDC84-205ENST00000528088 LIMCH1Q9UPQ0 1083 aa12.67□□□□□ -0.38
CCDC84-205ENST00000528088 PFKFB2O60825 505 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 CYBAP13498 195 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 CNGA1P29973 690 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 NAPAP54920 295 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 SCRN1Q12765 414 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 BAATQ14032 418 aaPredicted RBP12.66□□□□□ -0.38
CCDC84-205ENST00000528088 ME3Q16798 604 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 DMRTA1Q5VZB9 504 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 ANO1Q5XXA6 986 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 SLC30A10Q6XR72 485 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 ANKLE1Q8NAG6 615 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 CLEC4DQ8WXI8 215 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 CUL5Q93034 780 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 SLC4A5Q9BY07 1137 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 CYP39A1Q9NYL5 469 aa12.66□□□□□ -0.38
CCDC84-205ENST00000528088 CFAP99D6REC4 459 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 ARHGAP33O14559 1287 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 LARGE1O95461 756 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 IFNAR1P17181 557 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 CAPN2P17655 700 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 RPS6P62753 249 aaKnown RBP12.65□□□□□ -0.38
CCDC84-205ENST00000528088 OLFML2BQ68BL8 750 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 ADAMTS19Q8TE59 1207 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 MAML3Q96JK9 1138 aa12.65□□□□□ -0.38
CCDC84-205ENST00000528088 MPHOSPH6Q99547 160 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms