RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 UBE2SQ16763 222 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 DUSP28Q4G0W2 176 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 GNASQ5JWF2 1037 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 PCNX4Q63HM2 1172 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 GALNT17Q6IS24 598 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 TAPT1Q6NXT6 567 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 USP17L6PQ6QN14 398 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 GIMAP8Q8ND71 665 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 DIS3LQ8TF46 1054 aaKnown RBP6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 GTF3C6Q969F1 213 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 LENG1Q96BZ8 264 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 GLT1D1Q96MS3 346 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 SENP6Q9GZR1 1112 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 KATNBL1Q9H079 304 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 UPF3AQ9H1J1 476 aaKnown RBP6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 POLR3EQ9NVU0 708 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 ORC3Q9UBD5 711 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 PRKAG2Q9UGJ0 569 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 TCEAL9Q9UHQ7 104 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 PCDHA6Q9UN73 950 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 PHF24Q9UPV7 400 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 KIF3AQ9Y496 699 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 PCDHA8Q9Y5H6 950 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 FRMPD4Q14CM0 1322 aa6.18□□□□□ -1.42
HMGB1P40-201ENST00000525121 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 RBM47A0AV96 593 aaKnown RBP6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 NOP56O00567 594 aaKnown RBP6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 MEIS2O14770 477 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 PPFIA3O75145 1194 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 ADAMTS4O75173 837 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 SMPD1P17405 629 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 ACLYP53396 1101 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 HMGN5P82970 282 aaKnown RBP6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 MTMR1Q13613 665 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 LAMC2Q13753 1193 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 NTRK3Q16288 839 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 KCNA10Q16322 511 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 ME3Q16798 604 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 UBE2Q1Q7Z7E8 422 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 VSIG10LQ86VR7 867 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 DHX37Q8IY37 1157 aaKnown RBP6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 NECAB1Q8N987 351 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 FAM184AQ8NB25 1140 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 FERMT2Q96AC1 680 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 TBC1D32Q96NH3 1257 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 LLPHQ9BRT6 129 aaKnown RBP6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 ALG1Q9BT22 464 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 ANO3Q9BYT9 981 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 ZMYND12Q9H0C1 365 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 MLXIPQ9HAP2 919 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 STARD7Q9NQZ5 370 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 PDGFCQ9NRA1 345 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 VPS54Q9P1Q0 977 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 GNEQ9Y223 722 aaKnown RBP6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 DDX49Q9Y6V7 483 aaKnown RBP6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 MROH7Q68CQ1 1323 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 PLXNA1Q9UIW2 1896 aa6.17□□□□□ -1.42
HMGB1P40-201ENST00000525121 A0A0U1RQG5 324 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 CCDC194A0A1B0GVG4 234 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 A0A1W2PQ45 241 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 A0A1W2PQY0 241 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 DCDC2CA8MYV0 355 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 TLR3O15455 904 aaKnown RBP6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 GGPS1O95749 300 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 ASGR1P07306 291 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 MYL3P08590 195 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 COL6A1P12109 1028 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 SREBF1P36956 1147 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 ATN1P54259 1190 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 ARHGAP4P98171 946 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 BEX3Q00994 111 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 SETQ01105 290 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 GNL2Q13823 731 aaKnown RBP6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 NEDD9Q14511 834 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 SAFBQ15424 915 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 PKN1Q16512 942 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 DGKDQ16760 1214 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 LY6KQ17RY6 165 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 JAKMIP3Q5VZ66 844 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 TYW1BQ6NUM6 668 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 KRT25Q7Z3Z0 450 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 CCDC83Q8IWF9 413 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 C7orf61Q8IZ16 206 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 BLIDQ8IZY5 108 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 KLHDC9Q8NEP7 349 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 IL31RAQ8NI17 732 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 GPRASP2Q96D09 838 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 SPATA33Q96N06 139 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 INPP4AQ96PE3 977 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 SDF4Q9BRK5 362 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 MTG1Q9BT17 334 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 KATNAL1Q9BW62 490 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 SEZ6LQ9BYH1 1024 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 BACH2Q9BYV9 841 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 RTEL1Q9NZ71 1219 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 PCDHA4Q9UN74 947 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 ATP11BQ9Y2G3 1177 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 ELP1O95163 1332 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 LRRC37A2A6NM11 1700 aa6.16□□□□□ -1.42
HMGB1P40-201ENST00000525121 DOCK3Q8IZD9 2030 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms