RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 PLCB1Q9NQ66 1216 aa11.22□□□□□ -0.61
SPIDR-224ENST00000524126 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.617e-7■■■■□ 21.8
SPIDR-224ENST00000524126 PCDH11XQ9BZA7 1347 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 PCDH11YQ9BZA8 1340 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 MYH7P12883 1935 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 LRRD1A4D1F6 860 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 BUB1O43683 1085 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 UBOX5O94941 541 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 PARP1P09874 1014 aaKnown RBP11.21□□□□□ -0.61
SPIDR-224ENST00000524126 TCP1P17987 556 aaKnown RBP11.21□□□□□ -0.61
SPIDR-224ENST00000524126 CCND1P24385 295 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 CTNNA1P35221 906 aaKnown RBP11.21□□□□□ -0.61
SPIDR-224ENST00000524126 PAK1Q13153 545 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 ADAM9Q13443 819 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 RALYLQ86SE5 291 aaKnown RBP11.21□□□□□ -0.61
SPIDR-224ENST00000524126 CCDC170Q8IYT3 715 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 C1orf131Q8NDD1 294 aaKnown RBP11.21□□□□□ -0.61
SPIDR-224ENST00000524126 TLR10Q9BXR5 811 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 TRIM4Q9C037 500 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 UBE2OQ9C0C9 1292 aaKnown RBP11.21□□□□□ -0.61
SPIDR-224ENST00000524126 OCEL1Q9H607 264 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 ASAP1Q9ULH1 1129 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 TRIM33Q9UPN9 1127 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 GDAQ9Y2T3 454 aa11.21□□□□□ -0.61
SPIDR-224ENST00000524126 SRPRBQ9Y5M8 271 aaKnown RBP11.21□□□□□ -0.61
SPIDR-224ENST00000524126 ECM29Q5VYK3 1845 aa11.21□□□□□ -0.62
SPIDR-224ENST00000524126 PARP4Q9UKK3 1724 aaKnown RBP11.21□□□□□ -0.62
SPIDR-224ENST00000524126 MRC1P22897 1456 aa11.21□□□□□ -0.62
SPIDR-224ENST00000524126 FAM205CA6NFA0 338 aa11.21□□□□□ -0.62
SPIDR-224ENST00000524126 ZSCAN9O15535 394 aaPredicted RBP11.21□□□□□ -0.62
SPIDR-224ENST00000524126 RAD51CO43502 376 aa11.21□□□□□ -0.62
SPIDR-224ENST00000524126 CTNND1O60716 968 aaKnown RBP11.21□□□□□ -0.62
SPIDR-224ENST00000524126 CDKL5O76039 1030 aa11.21□□□□□ -0.62
SPIDR-224ENST00000524126 CLSTN1O94985 981 aa11.21□□□□□ -0.62
SPIDR-224ENST00000524126 LUC7L3O95232 432 aaKnown RBP11.21□□□□□ -0.62
SPIDR-224ENST00000524126 PAEPP09466 180 aa11.21□□□□□ -0.62
SPIDR-224ENST00000524126 ATP2A2P16615 1042 aaKnown RBP11.21□□□□□ -0.62
SPIDR-224ENST00000524126 IARSP41252 1262 aaKnown RBP11.21□□□□□ -0.62
SPIDR-224ENST00000524126 POLE2P56282 527 aa11.21□□□□□ -0.62
SPIDR-224ENST00000524126 SH3RF1Q7Z6J0 888 aa11.21□□□□□ -0.62
SPIDR-224ENST00000524126 TTC5Q8N0Z6 440 aa11.21□□□□□ -0.62
SPIDR-224ENST00000524126 ELAC2Q9BQ52 826 aaKnown RBP11.21□□□□□ -0.62
SPIDR-224ENST00000524126 ADAM22Q9P0K1 906 aa11.21□□□□□ -0.62
SPIDR-224ENST00000524126 NWD2Q9ULI1 1742 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 CFAP73A6NFT4 308 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 FGAP02671 866 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 GSTA1P08263 222 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 RARAP10276 462 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 KIF5BP33176 963 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 FLT3P36888 993 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 MTA1Q13330 715 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 SAFBQ15424 915 aaKnown RBP eCLIP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 IMMTQ16891 758 aaKnown RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 LRRC23Q53EV4 343 aaPredicted RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 RNF220Q5VTB9 566 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 CYB5R4Q7L1T6 521 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 KLHL7Q8IXQ5 586 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 NCOA7Q8NI08 942 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 OXER1Q8TDS5 423 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 WHAMMQ8TF30 809 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 UBLCP1Q8WVY7 318 aaPredicted RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 SYMPKQ92797 1274 aaKnown RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 XPO6Q96QU8 1125 aaKnown RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 IFIH1Q9BYX4 1025 aaKnown RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 NEUROG2Q9H2A3 272 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 ECT2Q9H8V3 914 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 WDR35Q9P2L0 1181 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 ZMYND8Q9ULU4 1186 aaPredicted RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 LGALS16A8MUM7 142 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 TOM1O60784 492 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 IGKV5-2P06315 115 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 TPP2P29144 1249 aaPredicted RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 ALDH3A1P30838 453 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 PTPN12Q05209 780 aaKnown RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 SPAG1Q07617 926 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 CUL3Q13618 768 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 TYW1BQ6NUM6 668 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 COPS6Q7L5N1 327 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 TRPM8Q7Z2W7 1104 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 ARMC9Q7Z3E5 817 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 TMC4Q7Z404 712 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 LRRC34Q8IZ02 419 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 CCDC82Q8N4S0 544 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 LINS1Q8NG48 757 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 ATL2Q8NHH9 583 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 XAGE3Q8WTP9 111 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 PLEKHG4BQ96PX9 1271 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 GSDMAQ96QA5 445 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 ZNHIT6Q9NWK9 470 aaKnown RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 NKX1-2Q9UD57 310 aaPredicted RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 RWDD2AQ9UIY3 292 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
SPIDR-224ENST00000524126 PCDHGA4Q9Y5G9 962 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 PCDHA13Q9Y5I0 950 aa11.2□□□□□ -0.62
SPIDR-224ENST00000524126 GLI3P10071 1580 aa11.19□□□□□ -0.62
SPIDR-224ENST00000524126 BCL9LQ86UU0 1499 aa11.19□□□□□ -0.62
SPIDR-224ENST00000524126 GPR75-ASB3A0A0A6YYF3 556 aa11.19□□□□□ -0.62
SPIDR-224ENST00000524126 RNF113AO15541 343 aaKnown RBP11.19□□□□□ -0.62
SPIDR-224ENST00000524126 SHBGP04278 402 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms