RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 CCPG1Q9ULG6 757 aa13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 LCTP09848 1927 aa13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 MYH4Q9Y623 1939 aa13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 RBM47A0AV96 593 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 MINDY4BA8MYZ0 360 aa13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 PRDM1O75626 825 aa13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 CALML3P27482 149 aa13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 ATP8B2P98198 1209 aa13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 PDE4DQ08499 809 aa13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 TRAF7Q6Q0C0 670 aa13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 KCTD1Q719H9 257 aa13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 FIBCD1Q8N539 461 aa13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 C7orf31Q8N865 590 aa13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 SSH3Q8TE77 659 aa13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 CHURC1Q8WUH1 139 aa13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 CEP95Q96GE4 821 aa13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 IFIH1Q9BYX4 1025 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 ADD3Q9UEY8 706 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 USP15Q9Y4E8 981 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-234ENST00000522227 NKRFO15226 690 aaKnown RBP eCLIP13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 ARIH2O95376 493 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 FDX1P10109 184 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 MCCP23508 829 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 RASGRP2Q7LDG7 609 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 ADGRD2Q7Z7M1 963 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 RBM23Q86U06 439 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 FAM160B2Q86V87 743 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 TMEM105Q8N8V8 129 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 STAG1Q8WVM7 1258 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 KAT2BQ92831 832 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 MSLNLQ96KJ4 702 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 RIPOR3Q96MK2 946 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 IL1RAPL2Q9NP60 686 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 GTF2IRD1Q9UHL9 959 aa13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 BARX2Q9UMQ3 279 aaPredicted RBP13.15□□□□□ -0.3
CTNNA1-234ENST00000522227 GREB1LQ9C091 1923 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 NFIBO00712 420 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 MMP3P08254 477 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 ADD2P35612 726 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 THPOP40225 353 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 RBL2Q08999 1139 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 PTK7Q13308 1070 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 CBX2Q14781 532 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 PTPN21Q16825 1174 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 TRIM71Q2Q1W2 868 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 SLC30A10Q6XR72 485 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 KIAA2013Q8IYS2 634 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 KCNG4Q8TDN1 519 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 SCFD2Q8WU76 684 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 FRAT1Q92837 279 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 TOP1MTQ969P6 601 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 C11orf84Q9BUA3 381 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 PHF7Q9BWX1 381 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 OSBPL7Q9BZF2 842 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 CLEC1BQ9P126 229 aa13.14□□□□□ -0.31
CTNNA1-234ENST00000522227 IGKV6D-41A0A0C4DH26 115 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 EYA4O95677 639 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 TTLL1O95922 423 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 BMPR1AP36894 532 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 SLC1A4P43007 532 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 PSEN2P49810 448 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 LY6KQ17RY6 165 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 SESTD1Q86VW0 696 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 RPAP2Q8IXW5 612 aaPredicted RBP13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 ZNF444Q8N0Y2 327 aaPredicted RBP13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 SMRP1Q8NCR6 262 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 GMCL1P1Q8NEA9 526 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 IL17RAQ96F46 866 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 LMAN2LQ9H0V9 348 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 EXOC6BQ9Y2D4 811 aa13.13□□□□□ -0.31
CTNNA1-234ENST00000522227 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 CTSHP09668 335 aa13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 ZNF286BP0CG31 522 aa13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 ICAM3P32942 547 aa13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 NRIP1P48552 1158 aa13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 DHX37Q8IY37 1157 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 SEPT8Q92599 483 aa13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 MKL1Q969V6 931 aa13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 ARPP21Q9UBL0 812 aaPredicted RBP13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 PRR12Q9ULL5 1215 aa13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 NOP58Q9Y2X3 529 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-234ENST00000522227 SORBS3O60504 671 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 RB1P06400 928 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 TRIM27P14373 513 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 CASTP20810 708 aaKnown RBP13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 NUBP1P53384 320 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 RARSP54136 660 aaKnown RBP13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 RBM10P98175 930 aaKnown RBP13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 HIC1Q14526 733 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 MFSD10Q14728 455 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 KIAA0753Q2KHM9 967 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 PLEKHG4Q58EX7 1191 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 MCTP2Q6DN12 878 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 SEPT14Q6ZU15 432 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 APOL5Q9BWW9 433 aa13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 PUS7LQ9H0K6 701 aaKnown RBP13.11□□□□□ -0.31
CTNNA1-234ENST00000522227 BOLA2Q9H3K6 86 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms