RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DPP9Q86TI2 863 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 GTF2IRD2Q86UP8 949 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 C12orf40Q86WS4 652 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 ZC3H7AQ8IWR0 971 aaKnown RBP4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 OR2C3Q8N628 320 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 TMEM145Q8NBT3 493 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 FAM13CQ8NE31 585 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 JADE3Q92613 823 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 NELL1Q92832 810 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 BHMTQ93088 406 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 KIAA1191Q96A73 305 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 ACSF2Q96CM8 615 aaPredicted RBP4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 KCTD12Q96CX2 325 aaKnown RBP4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 ZBTB10Q96DT7 871 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 PAWRQ96IZ0 340 aaKnown RBP4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 KLF16Q9BXK1 252 aaPredicted RBP4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 PLEKHA5Q9HAU0 1116 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 ITM2CQ9NQX7 267 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 CYP26B1Q9NR63 512 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 MARK1Q9P0L2 795 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 H2AFY2Q9P0M6 372 aaPredicted RBP4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 PDP2Q9P2J9 529 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 COQ6Q9Y2Z9 468 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 MAGED1Q9Y5V3 778 aaPredicted RBP4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 TACC3Q9Y6A5 838 aa4.66□□□□□ -1.66
RNU4-60P-201ENST00000517239 A0A087WV62 115 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 PTPDC1A2A3K4 754 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 PRAMEF27A3QJZ7 478 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 FIGNL2A6NMB9 653 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 GOLIM4O00461 696 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 WNT7AO00755 349 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 RGS13O14921 159 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 CLEC3AO75596 197 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 TUSC2O75896 110 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 SMNDC1O75940 238 aaKnown RBP eCLIP4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 BAIAP3O94812 1187 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 TBC1D8O95759 1140 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 POU2F2P09086 479 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 ESRRAP11474 423 aaPredicted RBP4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 HOXD8P13378 290 aaPredicted RBP4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 TNFSF4P23510 183 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 PEX2P28328 305 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 GPR3P46089 330 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 YARSP54577 528 aaKnown RBP4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 GFRA1P56159 465 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 ETF1P62495 437 aaKnown RBP4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 MAP4K2Q12851 820 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 SEPT2Q15019 361 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 TAF12Q16514 161 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 PRSS53Q2L4Q9 553 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 SLC45A4Q5BKX6 768 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 FAM209BQ5JX69 171 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 DGKKQ5KSL6 1271 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 SAMD5Q5TGI4 173 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 SLC6A19Q695T7 634 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 CYFIP1Q7L576 1253 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 GPR155Q7Z3F1 870 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 SNX32Q86XE0 403 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 DCAF4Q8WV16 495 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 SMARCC1Q92922 1105 aaPredicted RBP4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 ATP6V1E2Q96A05 226 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 MARVELD3Q96A59 401 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 CCDC140Q96MF4 163 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 NUDT16L1Q9BRJ7 211 aaKnown RBP4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 NUP62CLQ9H1M0 184 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 UNC45AQ9H3U1 944 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 IGFLR1Q9H665 355 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 PRKRIP1Q9H875 184 aaPredicted RBP4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 CERS4Q9HA82 394 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 SMYD2Q9NRG4 433 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 MRGBPQ9NV56 204 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 CACNA2D2Q9NY47 1150 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 ADAM30Q9UKF2 790 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 NOC2LQ9Y3T9 749 aaKnown RBP4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 NUB1Q9Y5A7 615 aa4.65□□□□□ -1.67
RNU4-60P-201ENST00000517239 ANKRD18BA2A2Z9 1011 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 SYNDIG1LA6NDD5 238 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 RHPN2P1A8MT19 583 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 ZBTB42B2RXF5 422 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 EIF3FO00303 357 aaPredicted RBP4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 KPNA5O15131 536 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 NCK2O43639 380 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 MAFKO60675 156 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 UBOX5O94941 541 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 NAT1P18440 290 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 CD247P20963 164 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 HOXC12P31275 282 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 ATICP31939 592 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 ELF1P32519 619 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 FXR1P51114 621 aaKnown RBP eCLIP4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 MAPK10P53779 464 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 PTPN5P54829 565 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 GSTM4Q03013 218 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 ICA1Q05084 483 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 BLMHQ13867 455 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 IKBKEQ14164 716 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 PPP2R5DQ14738 602 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 NBPF8Q3BBV2 869 aa4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 GPATCH4Q5T3I0 446 aaKnown RBP4.64□□□□□ -1.67
RNU4-60P-201ENST00000517239 SPATA1Q5VX52 437 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms