RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 NPY5RQ15761 445 aa18.23■□□□□ 0.51
HDAC7-224ENST00000488927 KRT40Q6A162 431 aa18.23■□□□□ 0.51
HDAC7-224ENST00000488927 TAPT1Q6NXT6 567 aa18.23■□□□□ 0.51
HDAC7-224ENST00000488927 KRT25Q7Z3Z0 450 aa18.23■□□□□ 0.51
HDAC7-224ENST00000488927 NLRX1Q86UT6 975 aa18.23■□□□□ 0.51
HDAC7-224ENST00000488927 FBXO18Q8NFZ0 1043 aa18.23■□□□□ 0.51
HDAC7-224ENST00000488927 TMEM260Q9NX78 707 aa18.23■□□□□ 0.51
HDAC7-224ENST00000488927 M0R2N6 131 aa18.22■□□□□ 0.51
HDAC7-224ENST00000488927 NKRFO15226 690 aaKnown RBP eCLIP18.22■□□□□ 0.51
HDAC7-224ENST00000488927 TGFB3P10600 412 aa18.22■□□□□ 0.51
HDAC7-224ENST00000488927 GJA8P48165 433 aa18.22■□□□□ 0.51
HDAC7-224ENST00000488927 TNFAIP2Q03169 654 aa18.22■□□□□ 0.51
HDAC7-224ENST00000488927 IL31RAQ8NI17 732 aa18.22■□□□□ 0.51
HDAC7-224ENST00000488927 CDHR1Q96JP9 859 aa18.22■□□□□ 0.51
HDAC7-224ENST00000488927 INPP4AQ96PE3 977 aaPredicted RBP18.22■□□□□ 0.51
HDAC7-224ENST00000488927 DEFB118Q96PH6 123 aa18.22■□□□□ 0.51
HDAC7-224ENST00000488927 DDX49Q9Y6V7 483 aaKnown RBP18.22■□□□□ 0.51
HDAC7-224ENST00000488927 CCDC194A0A1B0GVG4 234 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 MAFGO15525 162 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 DUSP11O75319 330 aaKnown RBP18.21■□□□□ 0.51
HDAC7-224ENST00000488927 SGPL1O95470 568 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 HSP90AA1P07900 732 aaKnown RBP18.21■□□□□ 0.51
HDAC7-224ENST00000488927 CYP3A4P08684 503 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 PDCP20941 246 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 MRPS9P82933 396 aaKnown RBP18.21■□□□□ 0.51
HDAC7-224ENST00000488927 ARHGAP4P98171 946 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 NONOQ15233 471 aaKnown RBP eCLIP18.21■□□□□ 0.51
HDAC7-224ENST00000488927 SEPT14Q6ZU15 432 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 RASGRP4Q8TDF6 673 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 U2AF1L4Q8WU68 220 aaKnown RBP18.21■□□□□ 0.51
HDAC7-224ENST00000488927 PGBD1Q96JS3 809 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 WDR11Q9BZH6 1224 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 SPC25Q9HBM1 224 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 GJB4Q9NTQ9 266 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 Q9Y3F1 56 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 CENPFP49454 3210 aa18.21■□□□□ 0.51
HDAC7-224ENST00000488927 CCDC85CA6NKD9 419 aa18.2■□□□□ 0.5
HDAC7-224ENST00000488927 ZNF76P36508 570 aa18.2■□□□□ 0.5
HDAC7-224ENST00000488927 ADCYAP1R1P41586 468 aa18.2■□□□□ 0.5
HDAC7-224ENST00000488927 USP11P51784 963 aa18.2■□□□□ 0.5
HDAC7-224ENST00000488927 BECN1Q14457 450 aa18.2■□□□□ 0.5
HDAC7-224ENST00000488927 DUSP28Q4G0W2 176 aa18.2■□□□□ 0.5
HDAC7-224ENST00000488927 LHX8Q68G74 356 aa18.2■□□□□ 0.5
HDAC7-224ENST00000488927 DIS3L2Q8IYB7 885 aaKnown RBP18.2■□□□□ 0.5
HDAC7-224ENST00000488927 CRYGNQ8WXF5 182 aa18.2■□□□□ 0.5
HDAC7-224ENST00000488927 GPRASP2Q96D09 838 aa18.2■□□□□ 0.5
HDAC7-224ENST00000488927 CRISPLD2Q9H0B8 497 aa18.2■□□□□ 0.5
HDAC7-224ENST00000488927 PDGFCQ9NRA1 345 aa18.2■□□□□ 0.5
HDAC7-224ENST00000488927 MRVI1Q9Y6F6 885 aa18.2■□□□□ 0.5
HDAC7-224ENST00000488927 LRRC37A2A6NM11 1700 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 H3BQV1 296 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 FIBPO43427 364 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 TFRCP02786 760 aaKnown RBP18.19■□□□□ 0.5
HDAC7-224ENST00000488927 TXNP10599 105 aaKnown RBP18.19■□□□□ 0.5
HDAC7-224ENST00000488927 ICAM3P32942 547 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 FOSBP53539 338 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 CEP55Q53EZ4 464 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 IFFO2Q5TF58 517 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 NIPA1Q7RTP0 329 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 ARRDC4Q8NCT1 418 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 NAP1L4Q99733 375 aaKnown RBP18.19■□□□□ 0.5
HDAC7-224ENST00000488927 FOXP1Q9H334 677 aaPredicted RBP18.19■□□□□ 0.5
HDAC7-224ENST00000488927 XPNPEP3Q9NQH7 507 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 RTEL1Q9NZ71 1219 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 OGDHLQ9ULD0 1010 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 UBIAD1Q9Y5Z9 338 aa18.19■□□□□ 0.5
HDAC7-224ENST00000488927 ADAMTS3O15072 1205 aa18.18■□□□□ 0.5
HDAC7-224ENST00000488927 RGS20O76081 388 aa18.18■□□□□ 0.5
HDAC7-224ENST00000488927 SMPD1P17405 629 aa18.18■□□□□ 0.5
HDAC7-224ENST00000488927 GUCY1B3Q02153 619 aa18.18■□□□□ 0.5
HDAC7-224ENST00000488927 MTMR1Q13613 665 aa18.18■□□□□ 0.5
HDAC7-224ENST00000488927 GNL2Q13823 731 aaKnown RBP18.18■□□□□ 0.5
HDAC7-224ENST00000488927 LARP1BQ659C4 914 aaKnown RBP18.18■□□□□ 0.5
HDAC7-224ENST00000488927 CCDC62Q6P9F0 684 aa18.18■□□□□ 0.5
HDAC7-224ENST00000488927 ANKLE1Q8NAG6 615 aa18.18■□□□□ 0.5
HDAC7-224ENST00000488927 GIMAP8Q8ND71 665 aaPredicted RBP18.18■□□□□ 0.5
HDAC7-224ENST00000488927 OXER1Q8TDS5 423 aa18.18■□□□□ 0.5
HDAC7-224ENST00000488927 TBCKQ8TEA7 893 aa18.18■□□□□ 0.5
HDAC7-224ENST00000488927 MXRA8Q9BRK3 442 aa18.18■□□□□ 0.5
HDAC7-224ENST00000488927 AP5M1Q9H0R1 490 aa18.18■□□□□ 0.5
HDAC7-224ENST00000488927 JADE2Q9NQC1 790 aa18.18■□□□□ 0.5
HDAC7-224ENST00000488927 GNEQ9Y223 722 aaKnown RBP18.18■□□□□ 0.5
HDAC7-224ENST00000488927 MCM3APO60318 1980 aa18.17■□□□□ 0.5
HDAC7-224ENST00000488927 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.17■□□□□ 0.5
HDAC7-224ENST00000488927 BTBD18B2RXH4 712 aa18.17■□□□□ 0.5
HDAC7-224ENST00000488927 SPATA31C2B4DYI2 1134 aa18.17■□□□□ 0.5
HDAC7-224ENST00000488927 PDIA4P13667 645 aaKnown RBP18.17■□□□□ 0.5
HDAC7-224ENST00000488927 ITGB5P18084 799 aa18.17■□□□□ 0.5
HDAC7-224ENST00000488927 CIITAP33076 1130 aa18.17■□□□□ 0.5
HDAC7-224ENST00000488927 GJA9P57773 515 aa18.17■□□□□ 0.5
HDAC7-224ENST00000488927 SETQ01105 290 aaPredicted RBP18.17■□□□□ 0.5
HDAC7-224ENST00000488927 BRDTQ58F21 947 aaPredicted RBP18.17■□□□□ 0.5
HDAC7-224ENST00000488927 MOXD1Q6UVY6 613 aa18.17■□□□□ 0.5
HDAC7-224ENST00000488927 PIK3AP1Q6ZUJ8 805 aa18.17■□□□□ 0.5
HDAC7-224ENST00000488927 RNF180Q86T96 592 aa18.17■□□□□ 0.5
HDAC7-224ENST00000488927 TLK2Q86UE8 772 aa18.17■□□□□ 0.5
HDAC7-224ENST00000488927 TNFRSF25Q93038 417 aa18.17■□□□□ 0.5
HDAC7-224ENST00000488927 SENP7Q9BQF6 1050 aa18.17■□□□□ 0.5
HDAC7-224ENST00000488927 DDX41Q9UJV9 622 aaKnown RBP18.17■□□□□ 0.5
HDAC7-224ENST00000488927 MEIS1O00470 390 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms