RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 RPUSD2Q8IZ73 545 aaKnown RBP10□□□□□ -0.81
PRKCB-208ENST00000487674 PNMA1Q8ND90 353 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 RGS22Q8NE09 1264 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 SYMPKQ92797 1274 aaKnown RBP10□□□□□ -0.81
PRKCB-208ENST00000487674 RWDD1Q9H446 243 aaPredicted RBP10□□□□□ -0.81
PRKCB-208ENST00000487674 PRDM12Q9H4Q4 367 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 GPHNQ9NQX3 736 aaPredicted RBP10□□□□□ -0.81
PRKCB-208ENST00000487674 DIAPH3Q9NSV4 1193 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 RYDENQ9NUL5 291 aaKnown RBP10□□□□□ -0.81
PRKCB-208ENST00000487674 TRMT13Q9NUP7 481 aaKnown RBP10□□□□□ -0.81
PRKCB-208ENST00000487674 PLA2G2EQ9NZK7 142 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 PRUNE2Q8WUY3 3088 aa10□□□□□ -0.81
PRKCB-208ENST00000487674 KIAA1217Q5T5P2 1943 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 SCN5AQ14524 2016 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 A6NJR5 290 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 HIP1O00291 1037 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 GTPBP6O43824 516 aaPredicted RBP9.99□□□□□ -0.81
PRKCB-208ENST00000487674 KDM4AO75164 1064 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 GOLGA8HP0CJ92 632 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 CYP2C9P11712 490 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 PSEN2P49810 448 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 NUCB1Q02818 461 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 TTLL4Q14679 1199 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 CDC37Q16543 378 aaPredicted RBP9.99□□□□□ -0.81
PRKCB-208ENST00000487674 USH1GQ495M9 461 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 ASPRV1Q53RT3 343 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 FAM47CQ5HY64 1035 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 TJAP1Q5JTD0 557 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 DMRTA1Q5VZB9 504 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 B4GALNT3Q6L9W6 998 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 NFRKBQ6P4R8 1299 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 PLEKHM2Q8IWE5 1019 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 VWCEQ96DN2 955 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 SCLYQ96I15 445 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 ZKSCAN3Q9BRR0 538 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 NKX2-4Q9H2Z4 354 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 KAT14Q9H8E8 782 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 SLC28A3Q9HAS3 691 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 HCSTQ9UBK5 93 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 YBX2Q9Y2T7 364 aaKnown RBP9.99□□□□□ -0.81
PRKCB-208ENST00000487674 SLC4A7Q9Y6M7 1214 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 SPTBN5Q9NRC6 3674 aaKnown RBP9.99□□□□□ -0.81
PRKCB-208ENST00000487674 ABCB11O95342 1321 aa9.99□□□□□ -0.81
PRKCB-208ENST00000487674 CHD9Q3L8U1 2897 aa9.98□□□□□ -0.81
PRKCB-208ENST00000487674 ZBBXA8MT70 800 aa9.98□□□□□ -0.81
PRKCB-208ENST00000487674 TXNP10599 105 aaKnown RBP9.98□□□□□ -0.81
PRKCB-208ENST00000487674 ATP2A2P16615 1042 aaKnown RBP9.98□□□□□ -0.81
PRKCB-208ENST00000487674 RFC2P35250 354 aa9.98□□□□□ -0.81
PRKCB-208ENST00000487674 PTPN11Q06124 597 aaPredicted RBP9.98□□□□□ -0.81
PRKCB-208ENST00000487674 IMMTQ16891 758 aaKnown RBP9.98□□□□□ -0.81
PRKCB-208ENST00000487674 NBPF20Q3BBV1 942 aa9.98□□□□□ -0.81
PRKCB-208ENST00000487674 CWC27Q6UX04 472 aaKnown RBP9.98□□□□□ -0.81
PRKCB-208ENST00000487674 PLPP6Q8IY26 295 aa9.98□□□□□ -0.81
PRKCB-208ENST00000487674 ENAHQ8N8S7 591 aaPredicted RBP9.98□□□□□ -0.81
PRKCB-208ENST00000487674 ANKS1AQ92625 1134 aa9.98□□□□□ -0.81
PRKCB-208ENST00000487674 ZSCAN10Q96SZ4 725 aaPredicted RBP9.98□□□□□ -0.81
PRKCB-208ENST00000487674 DSCC1Q9BVC3 393 aa9.98□□□□□ -0.81
PRKCB-208ENST00000487674 CPVLQ9H3G5 476 aa9.98□□□□□ -0.81
PRKCB-208ENST00000487674 PCDHA11Q9Y5I1 949 aa9.98□□□□□ -0.81
PRKCB-208ENST00000487674 B4E1Z4 1266 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 ARIH2O95376 493 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 PARP1P09874 1014 aaKnown RBP9.97□□□□□ -0.81
PRKCB-208ENST00000487674 ACTN1P12814 892 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 RABGGTBP53611 331 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 FOXK1P85037 733 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 ADGRE1Q14246 886 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 QRICH1Q2TAL8 776 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 PPP2R2DQ66LE6 453 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 CCDC62Q6P9F0 684 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 MCF2L2Q86YR7 1114 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 ADGRF4Q8IZF3 695 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 SYTL5Q8TDW5 730 aaPredicted RBP9.97□□□□□ -0.81
PRKCB-208ENST00000487674 NSUN6Q8TEA1 469 aaKnown RBP9.97□□□□□ -0.81
PRKCB-208ENST00000487674 ATXN2LQ8WWM7 1075 aaKnown RBP9.97□□□□□ -0.81
PRKCB-208ENST00000487674 COPS5Q92905 334 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 UBA5Q9GZZ9 404 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 CNNM2Q9H8M5 875 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 THEGQ9P2T0 379 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 CTNNA3Q9UI47 895 aa9.97□□□□□ -0.81
PRKCB-208ENST00000487674 DHX16O60231 1041 aaKnown RBP9.96□□□□□ -0.82
PRKCB-208ENST00000487674 GH1P01241 217 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 IGHDP01880 384 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 MMP3P08254 477 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 IGFBP4P22692 258 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 ARHGAP1Q07960 439 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 BFSP2Q13515 415 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 DEFB128Q7Z7B8 93 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 SESTD1Q86VW0 696 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 FBXO11Q86XK2 927 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 CCDC155Q8N6L0 562 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 RETREG2Q8NC44 543 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 AFG1LQ8WV93 481 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 PPM1EQ8WY54 764 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 IWS1Q96ST2 819 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 SLC9A7Q96T83 725 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 RMDN3Q96TC7 470 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 UBAC1Q9BSL1 405 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 KRT23Q9C075 422 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 PRDM6Q9NQX0 595 aa9.96□□□□□ -0.82
PRKCB-208ENST00000487674 COL20A1Q9P218 1284 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms