RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 PPP1R13LQ8WUF5 828 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 DCAF4Q8WV16 495 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 PURBQ96QR8 312 aaKnown RBP9.04□□□□□ -0.96
PDPN-205ENST00000487038 RANBP17Q9H2T7 1088 aaKnown RBP9.04□□□□□ -0.96
PDPN-205ENST00000487038 EPB41L4AQ9HCS5 686 aaPredicted RBP9.04□□□□□ -0.96
PDPN-205ENST00000487038 CLDND1Q9NY35 253 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 GTF2IRD1Q9UHL9 959 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 H3BNC9 293 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 NFIBO00712 420 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 NBNO60934 754 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 LGR5O75473 907 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 GH1P01241 217 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 MMP3P08254 477 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 MS4A1P11836 297 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 RLBP1P12271 317 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 IRS1P35568 1242 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 SNAP25P60880 206 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 HTRA4P83105 476 aaPredicted RBP9.03□□□□□ -0.96
PDPN-205ENST00000487038 PTK7Q13308 1070 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 GPM6BQ13491 265 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 EPC2Q52LR7 807 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 HERC4Q5GLZ8 1057 aaPredicted RBP9.03□□□□□ -0.96
PDPN-205ENST00000487038 IFNL3Q8IZI9 196 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 KBTBD3Q8NAB2 608 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 SP7Q8TDD2 431 aaPredicted RBP9.03□□□□□ -0.96
PDPN-205ENST00000487038 CHMP4CQ96CF2 233 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 GPATCH3Q96I76 525 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 YME1L1Q96TA2 773 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 NAPBQ9H115 298 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 IRF2BPLQ9H1B7 796 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 PTPRZ1P23471 2315 aaPredicted RBP9.03□□□□□ -0.96
PDPN-205ENST00000487038 MYO7AQ13402 2215 aa9.03□□□□□ -0.96
PDPN-205ENST00000487038 TECTAO75443 2155 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 PATL2C9JE40 543 aaKnown RBP9.02□□□□□ -0.97
PDPN-205ENST00000487038 EDNRBP24530 442 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 PPARAQ07869 468 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 GPNMBQ14956 572 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 SMAD2Q15796 467 aaKnown RBP9.02□□□□□ -0.97
PDPN-205ENST00000487038 DGKDQ16760 1214 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 TCEAL5Q5H9L2 206 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 SYDE2Q5VT97 1194 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 BMP8AQ7Z5Y6 402 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 RPAINQ86UA6 219 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 FBXO11Q86XK2 927 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 DHX38Q92620 1227 aaKnown RBP9.02□□□□□ -0.97
PDPN-205ENST00000487038 COPS5Q92905 334 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 LRRCC1Q9C099 1032 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 MUTYHQ9UIF7 546 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 MTMR7Q9Y216 660 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 WDR19Q8NEZ3 1342 aa9.02□□□□□ -0.97
PDPN-205ENST00000487038 ZNF292O60281 2723 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 RNF113AO15541 343 aaKnown RBP9.01□□□□□ -0.97
PDPN-205ENST00000487038 GFRA3O60609 400 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 PLXNA3P51805 1871 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 RPS6P62753 249 aaKnown RBP9.01□□□□□ -0.97
PDPN-205ENST00000487038 SMAD4Q13485 552 aaKnown RBP9.01□□□□□ -0.97
PDPN-205ENST00000487038 COL19A1Q14993 1142 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 DHX37Q8IY37 1157 aaKnown RBP9.01□□□□□ -0.97
PDPN-205ENST00000487038 TMEM192Q8IY95 271 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 PRSS33Q8NF86 280 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 AFG1LQ8WV93 481 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 EDAQ92838 391 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 OSBP2Q969R2 916 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 CTAGE1Q96RT6 745 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 LMAN2LQ9H0V9 348 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 CHMP4BQ9H444 224 aaKnown RBP9.01□□□□□ -0.97
PDPN-205ENST00000487038 ECHDC1Q9NTX5 307 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 HDAC6Q9UBN7 1215 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 RWDD3Q9Y3V2 267 aa9.01□□□□□ -0.97
PDPN-205ENST00000487038 KAT6AQ92794 2004 aa9□□□□□ -0.97
PDPN-205ENST00000487038 M0R2C6 588 aa9□□□□□ -0.97
PDPN-205ENST00000487038 MBTPS2O43462 519 aa9□□□□□ -0.97
PDPN-205ENST00000487038 ARIH2O95376 493 aa9□□□□□ -0.97
PDPN-205ENST00000487038 F2P00734 622 aa9□□□□□ -0.97
PDPN-205ENST00000487038 PSEN2P49810 448 aa9□□□□□ -0.97
PDPN-205ENST00000487038 KIAA0753Q2KHM9 967 aa9□□□□□ -0.97
PDPN-205ENST00000487038 ZNF618Q5T7W0 954 aa9□□□□□ -0.97
PDPN-205ENST00000487038 BTNL9Q6UXG8 535 aa9□□□□□ -0.97
PDPN-205ENST00000487038 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9□□□□□ -0.97
PDPN-205ENST00000487038 RASGRP2Q7LDG7 609 aa9□□□□□ -0.97
PDPN-205ENST00000487038 CHST3Q7LGC8 479 aa9□□□□□ -0.97
PDPN-205ENST00000487038 RNF135Q8IUD6 432 aa9□□□□□ -0.97
PDPN-205ENST00000487038 PPP2R3CQ969Q6 453 aa9□□□□□ -0.97
PDPN-205ENST00000487038 PBXIP1Q96AQ6 731 aa9□□□□□ -0.97
PDPN-205ENST00000487038 PHOX2BQ99453 314 aa9□□□□□ -0.97
PDPN-205ENST00000487038 ALG1Q9BT22 464 aa9□□□□□ -0.97
PDPN-205ENST00000487038 C11orf84Q9BUA3 381 aaPredicted RBP9□□□□□ -0.97
PDPN-205ENST00000487038 MAF1Q9H063 256 aa9□□□□□ -0.97
PDPN-205ENST00000487038 DDX19BQ9UMR2 479 aa9□□□□□ -0.97
PDPN-205ENST00000487038 DMDP11532 3685 aa9□□□□□ -0.97
PDPN-205ENST00000487038 CACNA1BQ00975 2339 aa9□□□□□ -0.97
PDPN-205ENST00000487038 LAMA4Q16363 1823 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 VPS13AQ96RL7 3174 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 TMEM221A6NGB7 291 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 RSPH10B2B2RC85 870 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 M0R296 226 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 STXBP3O00186 592 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 RANBP6O60518 1105 aaKnown RBP8.99□□□□□ -0.97
PDPN-205ENST00000487038 RB1P06400 928 aa8.99□□□□□ -0.97
PDPN-205ENST00000487038 RSPH10BP0C881 870 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms