RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 XRRA1Q6P2D8 792 aa13□□□□□ -0.33
NUP50-216ENST00000486184 EEPD1Q7L9B9 569 aa13□□□□□ -0.33
NUP50-216ENST00000486184 FBXO16Q8IX29 292 aaPredicted RBP13□□□□□ -0.33
NUP50-216ENST00000486184 DIS3L2Q8IYB7 885 aaKnown RBP13□□□□□ -0.33
NUP50-216ENST00000486184 FBXO18Q8NFZ0 1043 aa13□□□□□ -0.33
NUP50-216ENST00000486184 RASGRP4Q8TDF6 673 aa13□□□□□ -0.33
NUP50-216ENST00000486184 SHISA4Q96DD7 197 aa13□□□□□ -0.33
NUP50-216ENST00000486184 HMX1Q9NP08 348 aaPredicted RBP13□□□□□ -0.33
NUP50-216ENST00000486184 VPS37CA5D8V6 355 aaPredicted RBP12.99□□□□□ -0.33
NUP50-216ENST00000486184 EIF3JO75822 258 aaKnown RBP12.99□□□□□ -0.33
NUP50-216ENST00000486184 SNAI1O95863 264 aaPredicted RBP12.99□□□□□ -0.33
NUP50-216ENST00000486184 CYBAP13498 195 aa12.99□□□□□ -0.33
NUP50-216ENST00000486184 EDNRBP24530 442 aa12.99□□□□□ -0.33
NUP50-216ENST00000486184 ACVR2BQ13705 512 aa12.99□□□□□ -0.33
NUP50-216ENST00000486184 GNPTABQ3T906 1256 aa12.99□□□□□ -0.33
NUP50-216ENST00000486184 MCTP1Q6DN14 999 aa12.99□□□□□ -0.33
NUP50-216ENST00000486184 NLRX1Q86UT6 975 aa12.99□□□□□ -0.33
NUP50-216ENST00000486184 MORC4Q8TE76 937 aa12.99□□□□□ -0.33
NUP50-216ENST00000486184 DDX49Q9Y6V7 483 aaKnown RBP12.99□□□□□ -0.33
NUP50-216ENST00000486184 MYH15Q9Y2K3 1946 aa12.99□□□□□ -0.33
NUP50-216ENST00000486184 DOCK5Q9H7D0 1870 aa12.99□□□□□ -0.33
NUP50-216ENST00000486184 BTBD18B2RXH4 712 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 AKR1A1P14550 325 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 SREBF1P36956 1147 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 ARHGAP4P98171 946 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 PRAMEF19Q5SWL8 479 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 SEPT14Q6ZU15 432 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 PIK3AP1Q6ZUJ8 805 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 VSIG10LQ86VR7 867 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 TNS4Q8IZW8 715 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 IL31RAQ8NI17 732 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 OXER1Q8TDS5 423 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 ARMC5Q96C12 935 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 ZNF333Q96JL9 665 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 TMEM106CQ9BVX2 250 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.98□□□□□ -0.33
NUP50-216ENST00000486184 RNF208Q9H0X6 261 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 FAM184BQ9ULE4 1060 aa12.98□□□□□ -0.33
NUP50-216ENST00000486184 M0R2N6 131 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 SEPT4O43236 478 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 MSCO60682 206 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 CCL5P13501 91 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 CCND3P30281 292 aaPredicted RBP12.97□□□□□ -0.33
NUP50-216ENST00000486184 NR5A1Q13285 461 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 TTLL4Q14679 1199 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 NPY5RQ15761 445 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 CCDC144BQ3MJ40 725 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 MAP3K21Q5TCX8 1036 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 KCNV1Q6PIU1 500 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 TBCKQ8TEA7 893 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 SCFD2Q8WU76 684 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 NAP1L4Q99733 375 aaKnown RBP12.97□□□□□ -0.33
NUP50-216ENST00000486184 UNC93B1Q9H1C4 597 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 FOXP1Q9H334 677 aaPredicted RBP12.97□□□□□ -0.33
NUP50-216ENST00000486184 RTEL1Q9NZ71 1219 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 MRVI1Q9Y6F6 885 aa12.97□□□□□ -0.33
NUP50-216ENST00000486184 ADAMTS3O15072 1205 aa12.96□□□□□ -0.33
NUP50-216ENST00000486184 IGHA2P01877 340 aa12.96□□□□□ -0.33
NUP50-216ENST00000486184 ZNF865P0CJ78 1059 aaPredicted RBP12.96□□□□□ -0.33
NUP50-216ENST00000486184 RARBP10826 455 aa12.96□□□□□ -0.33
NUP50-216ENST00000486184 PDIA4P13667 645 aaKnown RBP12.96□□□□□ -0.33
NUP50-216ENST00000486184 USP11P51784 963 aa12.96□□□□□ -0.33
NUP50-216ENST00000486184 TNFAIP2Q03169 654 aa12.96□□□□□ -0.33
NUP50-216ENST00000486184 INF2Q27J81 1249 aa12.96□□□□□ -0.33
NUP50-216ENST00000486184 IQSEC1Q6DN90 963 aa12.96□□□□□ -0.33
NUP50-216ENST00000486184 NEK8Q86SG6 692 aa12.96□□□□□ -0.33
NUP50-216ENST00000486184 TRPV1Q8NER1 839 aa12.96□□□□□ -0.33
NUP50-216ENST00000486184 ZFP91Q96JP5 570 aaPredicted RBP12.96□□□□□ -0.33
NUP50-216ENST00000486184 CDHR1Q96JP9 859 aa12.96□□□□□ -0.33
NUP50-216ENST00000486184 WDR11Q9BZH6 1224 aa12.96□□□□□ -0.33
NUP50-216ENST00000486184 DDX20Q9UHI6 824 aaKnown RBP12.96□□□□□ -0.33
NUP50-216ENST00000486184 NOL7Q9UMY1 257 aaKnown RBP12.96□□□□□ -0.33
NUP50-216ENST00000486184 NKRFO15226 690 aaKnown RBP eCLIP12.95□□□□□ -0.34
NUP50-216ENST00000486184 FIBPO43427 364 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 CYP3A4P08684 503 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 TXNP10599 105 aaKnown RBP12.95□□□□□ -0.34
NUP50-216ENST00000486184 SYT1P21579 422 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 ADCYAP1R1P41586 468 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 MRPS9P82933 396 aaKnown RBP12.95□□□□□ -0.34
NUP50-216ENST00000486184 SETQ01105 290 aaPredicted RBP12.95□□□□□ -0.34
NUP50-216ENST00000486184 MTMR1Q13613 665 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 MTFR1Q15390 333 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 LETM2Q2VYF4 491 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 CEP55Q53EZ4 464 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 TAPT1Q6NXT6 567 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 NOSTRINQ8IVI9 506 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 GPRASP2Q96D09 838 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 MXRA8Q9BRK3 442 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 KATNBL1Q9H079 304 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 SPC25Q9HBM1 224 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 PDGFCQ9NRA1 345 aa12.95□□□□□ -0.34
NUP50-216ENST00000486184 STX6O43752 255 aa12.94□□□□□ -0.34
NUP50-216ENST00000486184 CCNT1O60563 726 aaKnown RBP12.94□□□□□ -0.34
NUP50-216ENST00000486184 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
NUP50-216ENST00000486184 PRR16Q569H4 304 aa12.94□□□□□ -0.34
NUP50-216ENST00000486184 PLA2G4DQ86XP0 818 aa12.94□□□□□ -0.34
NUP50-216ENST00000486184 TNFRSF25Q93038 417 aa12.94□□□□□ -0.34
NUP50-216ENST00000486184 ABHD8Q96I13 439 aa12.94□□□□□ -0.34
NUP50-216ENST00000486184 INPP4AQ96PE3 977 aaPredicted RBP12.94□□□□□ -0.34
NUP50-216ENST00000486184 DEFB118Q96PH6 123 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms