RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 LCP1P13796 627 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 KCNA6P17658 529 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 SDSP20132 328 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 PDE6BP35913 854 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 GYS2P54840 703 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 CHMP4BP1P59074 171 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 SUMO1P63165 101 aaKnown RBP3.42□□□□□ -1.86
ITGB1-213ENST00000484088 AMPD2Q01433 879 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 PABPC4Q13310 644 aaKnown RBP eCLIP3.42□□□□□ -1.86
ITGB1-213ENST00000484088 INF2Q27J81 1249 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 VMACQ2NL98 169 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 VWA3BQ502W6 1294 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 TM4SF20Q53R12 229 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 ACBD5Q5T8D3 534 aaPredicted RBP3.42□□□□□ -1.86
ITGB1-213ENST00000484088 STYK1Q6J9G0 422 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 FGD2Q7Z6J4 655 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 FAM129CQ86XR2 697 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 SYNPOQ8N3V7 929 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 MARCH10Q8NA82 808 aaPredicted RBP3.42□□□□□ -1.86
ITGB1-213ENST00000484088 NLGN2Q8NFZ4 835 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 MZB1Q8WU39 189 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 PPP1R14AQ96A00 147 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 PTCHD1Q96NR3 888 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 MRPL4Q9BYD3 311 aaKnown RBP3.42□□□□□ -1.86
ITGB1-213ENST00000484088 BCAS3Q9H6U6 928 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 SLC52A2Q9HAB3 445 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 RXFP1Q9HBX9 757 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 LRP2BPQ9P2M1 347 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 FBXL7Q9UJT9 491 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.42□□□□□ -1.86
ITGB1-213ENST00000484088 BACE2Q9Y5Z0 518 aa3.42□□□□□ -1.86
ITGB1-213ENST00000484088 CCDC163A0A0D9SF12 145 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 WTIPA6NIX2 430 aaPredicted RBP3.41□□□□□ -1.86
ITGB1-213ENST00000484088 AGRPO00253 132 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 N4BP3O15049 544 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 SNRPB2P08579 225 aaKnown RBP3.41□□□□□ -1.86
ITGB1-213ENST00000484088 VIL1P09327 827 aaKnown RBP3.41□□□□□ -1.86
ITGB1-213ENST00000484088 PLS3P13797 630 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 HTRA3P83110 453 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 POU4F1Q01851 419 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 FNDC3BQ53EP0 1204 aaKnown RBP3.41□□□□□ -1.86
ITGB1-213ENST00000484088 GALNT18Q6P9A2 607 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 KCNT2Q6UVM3 1135 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 CRACR2BQ8N4Y2 399 aaPredicted RBP3.41□□□□□ -1.86
ITGB1-213ENST00000484088 SYT8Q8NBV8 401 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 NUP43Q8NFH3 380 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 NINJ1Q92982 152 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 CCDC140Q96MF4 163 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 MMP19Q99542 508 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 FAM126AQ9BYI3 521 aaPredicted RBP3.41□□□□□ -1.86
ITGB1-213ENST00000484088 ASCC2Q9H1I8 757 aaPredicted RBP3.41□□□□□ -1.86
ITGB1-213ENST00000484088 CLEC1BQ9P126 229 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 TRAF6Q9Y4K3 522 aa3.41□□□□□ -1.86
ITGB1-213ENST00000484088 TCAF2A6NFQ2 919 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 GSG1L2A8MUP6 293 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 NUDT19A8MXV4 375 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 SRGAP3O43295 1099 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 NUAK1O60285 661 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 CPP00450 1065 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 MC3RP41968 323 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 ECI1P42126 302 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 MASP1P48740 699 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 CYP4F8P98187 520 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 TCEA2Q15560 299 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 SLC14A2Q15849 920 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 C21orf62-AS1Q17RA5 79 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 EEF1DP3Q658K8 133 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 ABHD17CQ6PCB6 329 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 NLRP10Q86W26 655 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 THNSL2Q86YJ6 484 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 ADGRG2Q8IZP9 1017 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 Q8N1Y9 231 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 RCBTB1Q8NDN9 531 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 KCTD13Q8WZ19 329 aa3.4□□□□□ -1.87
ITGB1-213ENST00000484088 TCRBV16S1A1N1A0A5B0 115 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 C7orf72A4D263 438 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 ARVCFO00192 962 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 RASGRP1O95267 797 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 TACR1P25103 407 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 CANXP27824 592 aaKnown RBP3.39□□□□□ -1.87
ITGB1-213ENST00000484088 LIMS1P48059 325 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 MAPKAPK2P49137 400 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 GABREP78334 506 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 ZNF200P98182 395 aaPredicted RBP3.39□□□□□ -1.87
ITGB1-213ENST00000484088 E4F1Q66K89 784 aaPredicted RBP3.39□□□□□ -1.87
ITGB1-213ENST00000484088 LILRA6Q6PI73 481 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 RSPO2Q6UXX9 243 aaPredicted RBP3.39□□□□□ -1.87
ITGB1-213ENST00000484088 TMC6Q7Z403 805 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 BRAPQ7Z569 592 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 RNF180Q86T96 592 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 CPNE8Q86YQ8 564 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 PPIL6Q8IXY8 311 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 PLEKHO2Q8TD55 490 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 DCAF4Q8WV16 495 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 PTPRN2Q92932 1015 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 SIGLEC10Q96LC7 697 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 CDC6Q99741 560 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 KRTAP4-5Q9BYR2 181 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 MTFR1LQ9H019 292 aa3.39□□□□□ -1.87
ITGB1-213ENST00000484088 PARD6AQ9NPB6 346 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms