RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ADAMTS3O15072 1205 aa22.57■■□□□ 1.2
LIME1-205ENST00000480139 RARBP10826 455 aa22.57■■□□□ 1.2
LIME1-205ENST00000480139 MYCLP12524 364 aaPredicted RBP22.57■■□□□ 1.2
LIME1-205ENST00000480139 SREBF1P36956 1147 aa22.57■■□□□ 1.2
LIME1-205ENST00000480139 MRPS9P82933 396 aaKnown RBP22.57■■□□□ 1.2
LIME1-205ENST00000480139 TRIM29Q14134 588 aa22.57■■□□□ 1.2
LIME1-205ENST00000480139 JAKMIP3Q5VZ66 844 aa22.57■■□□□ 1.2
LIME1-205ENST00000480139 OGDHLQ9ULD0 1010 aa22.57■■□□□ 1.2
LIME1-205ENST00000480139 KCNJ14Q9UNX9 436 aa22.57■■□□□ 1.2
LIME1-205ENST00000480139 DUSP11O75319 330 aaKnown RBP22.56■■□□□ 1.2
LIME1-205ENST00000480139 ADCYAP1R1P41586 468 aa22.56■■□□□ 1.2
LIME1-205ENST00000480139 TNFAIP2Q03169 654 aa22.56■■□□□ 1.2
LIME1-205ENST00000480139 FAM184AQ8NB25 1140 aa22.56■■□□□ 1.2
LIME1-205ENST00000480139 CRYGNQ8WXF5 182 aa22.56■■□□□ 1.2
LIME1-205ENST00000480139 INPP4AQ96PE3 977 aaPredicted RBP22.56■■□□□ 1.2
LIME1-205ENST00000480139 PDGFCQ9NRA1 345 aa22.56■■□□□ 1.2
LIME1-205ENST00000480139 GJB4Q9NTQ9 266 aa22.56■■□□□ 1.2
LIME1-205ENST00000480139 MYH7BA7E2Y1 1941 aa22.56■■□□□ 1.2
LIME1-205ENST00000480139 POTEFA5A3E0 1075 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 NKRFO15226 690 aaKnown RBP eCLIP22.55■■□□□ 1.21e-7■■■□□ 16.1
LIME1-205ENST00000480139 ADCY6O43306 1168 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 RGS20O76081 388 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 MMP1P03956 469 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 TTLL4Q14679 1199 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 GNPTABQ3T906 1256 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 DUSP28Q4G0W2 176 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 KCNV1Q6PIU1 500 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 ANKLE1Q8NAG6 615 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 PGBD1Q96JS3 809 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 WDR11Q9BZH6 1224 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 BRMS1Q9HCU9 246 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 GNEQ9Y223 722 aaKnown RBP22.55■■□□□ 1.2
LIME1-205ENST00000480139 Q9Y3F1 56 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 BRCA2P51587 3418 aa22.55■■□□□ 1.2
LIME1-205ENST00000480139 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.54■■□□□ 1.2
LIME1-205ENST00000480139 CYP3A4P08684 503 aa22.54■■□□□ 1.2
LIME1-205ENST00000480139 NKX3-2P78367 333 aa22.54■■□□□ 1.2
LIME1-205ENST00000480139 KRT40Q6A162 431 aa22.54■■□□□ 1.2
LIME1-205ENST00000480139 CCDC62Q6P9F0 684 aa22.54■■□□□ 1.2
LIME1-205ENST00000480139 HSCBQ8IWL3 235 aa22.54■■□□□ 1.2
LIME1-205ENST00000480139 RASGRP4Q8TDF6 673 aa22.54■■□□□ 1.2
LIME1-205ENST00000480139 INTS4Q96HW7 963 aaKnown RBP22.54■■□□□ 1.2
LIME1-205ENST00000480139 C8orf76Q96K31 380 aa22.54■■□□□ 1.2
LIME1-205ENST00000480139 UPF3AQ9H1J1 476 aaKnown RBP22.54■■□□□ 1.2
LIME1-205ENST00000480139 XPNPEP3Q9NQH7 507 aa22.54■■□□□ 1.2
LIME1-205ENST00000480139 TGFB3P10600 412 aa22.53■■□□□ 1.2
LIME1-205ENST00000480139 SMPD1P17405 629 aa22.53■■□□□ 1.2
LIME1-205ENST00000480139 ICAM3P32942 547 aa22.53■■□□□ 1.2
LIME1-205ENST00000480139 KRT2P35908 639 aa22.53■■□□□ 1.2
LIME1-205ENST00000480139 ARHGAP4P98171 946 aa22.53■■□□□ 1.2
LIME1-205ENST00000480139 SEPT14Q6ZU15 432 aa22.53■■□□□ 1.2
LIME1-205ENST00000480139 KRT25Q7Z3Z0 450 aa22.53■■□□□ 1.2
LIME1-205ENST00000480139 FBXO18Q8NFZ0 1043 aa22.53■■□□□ 1.2
LIME1-205ENST00000480139 GPRASP2Q96D09 838 aa22.53■■□□□ 1.2
LIME1-205ENST00000480139 SMC3Q9UQE7 1217 aa22.53■■□□□ 1.2
LIME1-205ENST00000480139 UBIAD1Q9Y5Z9 338 aa22.53■■□□□ 1.2
LIME1-205ENST00000480139 SYNRGQ9UMZ2 1314 aa22.53■■□□□ 1.2
LIME1-205ENST00000480139 ADAMTS4O75173 837 aa22.52■■□□□ 1.2
LIME1-205ENST00000480139 TFRCP02786 760 aaKnown RBP22.52■■□□□ 1.2
LIME1-205ENST00000480139 TXNP10599 105 aaKnown RBP22.52■■□□□ 1.2
LIME1-205ENST00000480139 GJB2P29033 226 aa22.52■■□□□ 1.2
LIME1-205ENST00000480139 SOX10P56693 466 aa22.52■■□□□ 1.2
LIME1-205ENST00000480139 NLRX1Q86UT6 975 aa22.52■■□□□ 1.2
LIME1-205ENST00000480139 MRVI1Q9Y6F6 885 aa22.52■■□□□ 1.2
LIME1-205ENST00000480139 MAFGO15525 162 aa22.51■■□□□ 1.19
LIME1-205ENST00000480139 FIBPO43427 364 aa22.51■■□□□ 1.19
LIME1-205ENST00000480139 ARIH2O95376 493 aa22.51■■□□□ 1.19
LIME1-205ENST00000480139 EN2P19622 333 aaPredicted RBP22.51■■□□□ 1.19
LIME1-205ENST00000480139 GJA9P57773 515 aa22.51■■□□□ 1.19
LIME1-205ENST00000480139 ANO1Q5XXA6 986 aa22.51■■□□□ 1.19
LIME1-205ENST00000480139 NIPA1Q7RTP0 329 aa22.51■■□□□ 1.19
LIME1-205ENST00000480139 TLK2Q86UE8 772 aa22.51■■□□□ 1.19
LIME1-205ENST00000480139 ARRDC4Q8NCT1 418 aa22.51■■□□□ 1.19
LIME1-205ENST00000480139 TNFRSF25Q93038 417 aa22.51■■□□□ 1.19
LIME1-205ENST00000480139 LENG1Q96BZ8 264 aaPredicted RBP22.51■■□□□ 1.19
LIME1-205ENST00000480139 CDHR1Q96JP9 859 aa22.51■■□□□ 1.19
LIME1-205ENST00000480139 DDX41Q9UJV9 622 aaKnown RBP22.51■■□□□ 1.19
LIME1-205ENST00000480139 SPATA31C2B4DYI2 1134 aa22.5■■□□□ 1.19
LIME1-205ENST00000480139 ITGB5P18084 799 aa22.5■■□□□ 1.19
LIME1-205ENST00000480139 CST5P28325 142 aaPredicted RBP22.5■■□□□ 1.19
LIME1-205ENST00000480139 USP11P51784 963 aa22.5■■□□□ 1.19
LIME1-205ENST00000480139 NONOQ15233 471 aaKnown RBP eCLIP22.5■■□□□ 1.19
LIME1-205ENST00000480139 SAFBQ15424 915 aaKnown RBP eCLIP22.5■■□□□ 1.19
LIME1-205ENST00000480139 CEP55Q53EZ4 464 aa22.5■■□□□ 1.19
LIME1-205ENST00000480139 RNF180Q86T96 592 aa22.5■■□□□ 1.19
LIME1-205ENST00000480139 DIS3L2Q8IYB7 885 aaKnown RBP22.5■■□□□ 1.19
LIME1-205ENST00000480139 OXER1Q8TDS5 423 aa22.5■■□□□ 1.19
LIME1-205ENST00000480139 MXRA8Q9BRK3 442 aa22.5■■□□□ 1.19
LIME1-205ENST00000480139 SPC25Q9HBM1 224 aa22.5■■□□□ 1.19
LIME1-205ENST00000480139 JADE2Q9NQC1 790 aa22.5■■□□□ 1.19
LIME1-205ENST00000480139 RTEL1Q9NZ71 1219 aa22.5■■□□□ 1.19
LIME1-205ENST00000480139 CCDC194A0A1B0GVG4 234 aa22.49■■□□□ 1.19
LIME1-205ENST00000480139 DNM1LO00429 736 aa22.49■■□□□ 1.19
LIME1-205ENST00000480139 CIITAP33076 1130 aa22.49■■□□□ 1.19
LIME1-205ENST00000480139 TMEM63BQ5T3F8 832 aa22.49■■□□□ 1.19
LIME1-205ENST00000480139 KLHDC9Q8NEP7 349 aa22.49■■□□□ 1.19
LIME1-205ENST00000480139 TBCKQ8TEA7 893 aa22.49■■□□□ 1.19
LIME1-205ENST00000480139 EMID1Q96A84 441 aaPredicted RBP22.49■■□□□ 1.19
LIME1-205ENST00000480139 ZFP91Q96JP5 570 aaPredicted RBP22.49■■□□□ 1.19
LIME1-205ENST00000480139 AP5M1Q9H0R1 490 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms