RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 PCDHA4Q9UN74 947 aa17.11■□□□□ 0.33
CDC42SE1-203ENST00000470278 KIF3AQ9Y496 699 aa17.11■□□□□ 0.33
CDC42SE1-203ENST00000470278 KIAA1217Q5T5P2 1943 aa17.1■□□□□ 0.33
CDC42SE1-203ENST00000470278 ZNF865P0CJ78 1059 aaPredicted RBP17.1■□□□□ 0.33
CDC42SE1-203ENST00000470278 EIF2AK2P19525 551 aaKnown RBP17.1■□□□□ 0.33
CDC42SE1-203ENST00000470278 PDE4DQ08499 809 aa17.1■□□□□ 0.33
CDC42SE1-203ENST00000470278 XRRA1Q6P2D8 792 aa17.1■□□□□ 0.33
CDC42SE1-203ENST00000470278 EHMT1Q9H9B1 1298 aa17.1■□□□□ 0.33
CDC42SE1-203ENST00000470278 HMX1Q9NP08 348 aaPredicted RBP17.1■□□□□ 0.33
CDC42SE1-203ENST00000470278 OGDHLQ9ULD0 1010 aa17.1■□□□□ 0.33
CDC42SE1-203ENST00000470278 NR2E3Q9Y5X4 410 aa17.1■□□□□ 0.33
CDC42SE1-203ENST00000470278 UNC80Q8N2C7 3258 aa17.1■□□□□ 0.33
CDC42SE1-203ENST00000470278 M0R2N6 131 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 EVI5O60447 810 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 DTNBO60941 627 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 STAM2O75886 525 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 NR3C2P08235 984 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 ACVR2BQ13705 512 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 TRIM29Q14134 588 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 STXBP2Q15833 593 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 PCNX4Q63HM2 1172 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 VSIG10LQ86VR7 867 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 FAM184AQ8NB25 1140 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 TRPV1Q8NER1 839 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 ANO3Q9BYT9 981 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 PCDHA6Q9UN73 950 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 PCDHA8Q9Y5H6 950 aa17.09■□□□□ 0.33
CDC42SE1-203ENST00000470278 ADAMTS3O15072 1205 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 SEPT4O43236 478 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 MSCO60682 206 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 MMP1P03956 469 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 COL6A1P12109 1028 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 CCND2P30279 289 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 SREBF1P36956 1147 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 BLIDQ8IZY5 108 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 ANKLE1Q8NAG6 615 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 IL31RAQ8NI17 732 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 CRYGNQ8WXF5 182 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 C8orf76Q96K31 380 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 GJB4Q9NTQ9 266 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 KCNJ14Q9UNX9 436 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 SMC3Q9UQE7 1217 aa17.08■□□□□ 0.32
CDC42SE1-203ENST00000470278 EYSQ5T1H1 3165 aa17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 A0A1W2PPC1 479 aa17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 RBM47A0AV96 593 aaKnown RBP17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 EIF3JO75822 258 aaKnown RBP17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 AKR1A1P14550 325 aa17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 GJB2P29033 226 aa17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 CCND3P30281 292 aaPredicted RBP17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 LHX8Q68G74 356 aa17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 KRT40Q6A162 431 aa17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 NECAB2Q7Z6G3 386 aa17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 FBXO16Q8IX29 292 aaPredicted RBP17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 C7orf61Q8IZ16 206 aa17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 FBXO18Q8NFZ0 1043 aa17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 BRMS1Q9HCU9 246 aa17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 TMEM260Q9NX78 707 aa17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 ZHX1Q9UKY1 873 aaPredicted RBP17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 ZMYND8Q9ULU4 1186 aaPredicted RBP17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 DDX49Q9Y6V7 483 aaKnown RBP17.07■□□□□ 0.32
CDC42SE1-203ENST00000470278 MYH7BA7E2Y1 1941 aa17.06■□□□□ 0.32
CDC42SE1-203ENST00000470278 CAPN2P17655 700 aa17.06■□□□□ 0.32
CDC42SE1-203ENST00000470278 PRAMEF19Q5SWL8 479 aa17.06■□□□□ 0.32
CDC42SE1-203ENST00000470278 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
CDC42SE1-203ENST00000470278 TAPT1Q6NXT6 567 aa17.06■□□□□ 0.32
CDC42SE1-203ENST00000470278 RASGRP4Q8TDF6 673 aa17.06■□□□□ 0.32
CDC42SE1-203ENST00000470278 INPP4AQ96PE3 977 aaPredicted RBP17.06■□□□□ 0.32
CDC42SE1-203ENST00000470278 DDX20Q9UHI6 824 aaKnown RBP17.06■□□□□ 0.32
CDC42SE1-203ENST00000470278 KRT2P35908 639 aa17.05■□□□□ 0.32
CDC42SE1-203ENST00000470278 MRPS9P82933 396 aaKnown RBP17.05■□□□□ 0.32
CDC42SE1-203ENST00000470278 CCDC144BQ3MJ40 725 aa17.05■□□□□ 0.32
CDC42SE1-203ENST00000470278 KRT25Q7Z3Z0 450 aa17.05■□□□□ 0.32
CDC42SE1-203ENST00000470278 SCFD2Q8WU76 684 aa17.05■□□□□ 0.32
CDC42SE1-203ENST00000470278 TNFRSF25Q93038 417 aa17.05■□□□□ 0.32
CDC42SE1-203ENST00000470278 FAM184BQ9ULE4 1060 aa17.05■□□□□ 0.32
CDC42SE1-203ENST00000470278 RGS20O76081 388 aa17.04■□□□□ 0.32
CDC42SE1-203ENST00000470278 CYP3A4P08684 503 aa17.04■□□□□ 0.32
CDC42SE1-203ENST00000470278 MYCLP12524 364 aaPredicted RBP17.04■□□□□ 0.32
CDC42SE1-203ENST00000470278 SYN1P17600 705 aa17.04■□□□□ 0.32
CDC42SE1-203ENST00000470278 BMP8BP34820 402 aa17.04■□□□□ 0.32
CDC42SE1-203ENST00000470278 ARHGAP4P98171 946 aa17.04■□□□□ 0.32
CDC42SE1-203ENST00000470278 GNPTABQ3T906 1256 aa17.04■□□□□ 0.32
CDC42SE1-203ENST00000470278 IQSEC1Q6DN90 963 aa17.04■□□□□ 0.32
CDC42SE1-203ENST00000470278 EEPD1Q7L9B9 569 aa17.04■□□□□ 0.32
CDC42SE1-203ENST00000470278 DIS3L2Q8IYB7 885 aaKnown RBP17.04■□□□□ 0.32
CDC42SE1-203ENST00000470278 PGBD1Q96JS3 809 aa17.04■□□□□ 0.32
CDC42SE1-203ENST00000470278 CNGA1P29973 690 aa17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 ICAM3P32942 547 aa17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 ADCYAP1R1P41586 468 aa17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 MAGEA10P43363 369 aaPredicted RBP17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 TTLL4Q14679 1199 aa17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 NONOQ15233 471 aaKnown RBP eCLIP17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 SAFBQ15424 915 aaKnown RBP eCLIP17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 KCNV1Q6PIU1 500 aa17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 OXER1Q8TDS5 423 aa17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 GPRASP2Q96D09 838 aa17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 FOXP1Q9H334 677 aaPredicted RBP17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 C11orf49Q9H6J7 331 aa17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 PDGFCQ9NRA1 345 aa17.03■□□□□ 0.32
CDC42SE1-203ENST00000470278 UBIAD1Q9Y5Z9 338 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms